Reorganize cargo dependencies and upgrade most of them (#1815)

* Reorganize cargo dependencies and upgrade most

* cargo update

* Attempt 2

* Polishing changes

* Comment out specta typescript flag-dependent code

* Fix test

node-graph/gpu-executor/Cargo.toml

@@ -7,19 +7,19 @@ license = "MIT OR Apache-2.0"
 [features]
 default = []
 
-# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html
-
 [dependencies]
+# Local dependencies
+node-macro = { path = "../node-macro" }
+
+# Workspace dependencies
 graphene-core = { workspace = true, features = ["std", "alloc", "gpu"] }
 graph-craft = { workspace = true }
-node-macro = { path = "../node-macro" }
 dyn-any = { workspace = true, features = ["log-bad-types", "rc", "glam"] }
 num-traits = { workspace = true }
 log = { workspace = true }
 serde = { workspace = true }
 glam = { workspace = true }
 base64 = { workspace = true }
-
 bytemuck = { workspace = true }
 anyhow = { workspace = true }
 futures = { workspace = true }