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try evaling the bash hook

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per https://github.com/conda/conda/issues/7980
This commit is contained in:
Alok Saldanha
2020-12-31 13:23:25 -05:00
parent 5e6faa4b02
commit 49d679e779
1 changed files with 2 additions and 0 deletions
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.github/workflows/pr-checks.yaml
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@@ -37,11 +37,13 @@ jobs:
- name: Build environment - name: Build environment
run: | run: |
conda env create -f environment.yml conda env create -f environment.yml
eval "$(conda shell.bash hook)"
conda activate cellxgene-gateway conda activate cellxgene-gateway
python setup.py install python setup.py install
- name: Run tests - name: Run tests
run: | run: |
eval "$(conda shell.bash hook)"
conda activate cellxgene-gateway conda activate cellxgene-gateway
python -m unittest discover tests python -m unittest discover tests
bash <(curl -s https://codecov.io/bash) bash <(curl -s https://codecov.io/bash)