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Sort os.listdir in filecrawler.py

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This commit is contained in:
Gervaise H. Henry
2020-05-17 14:57:20 -04:00
committed by Alokito
parent 84db11077a
commit eb4693f1fa
1 changed files with 3 additions and 3 deletions
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cellxgene_gateway/filecrawl.py
+3 -3
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@@ -8,7 +8,7 @@ def recurse_dir(path):
"The given path does not exist.", status.HTTP_400_BAD_REQUEST "The given path does not exist.", status.HTTP_400_BAD_REQUEST
) )
all_entries = os.listdir(path) all_entries = sorted(os.listdir(path))
def is_h5ad(el): def is_h5ad(el):
return el.endswith('.h5ad') and os.path.isfile(os.path.join(path, el)) return el.endswith('.h5ad') and os.path.isfile(os.path.join(path, el))
h5ad_entries = [x for x in all_entries if is_h5ad(x)] h5ad_entries = [x for x in all_entries if is_h5ad(x)]
@@ -22,7 +22,7 @@ def recurse_dir(path):
"name": x[:-13] if (len(x) > 13 and x[-13] in ['-','_']) else ( "name": x[:-13] if (len(x) > 13 and x[-13] in ['-','_']) else (
x[:-4] if x.endswith('.csv') else x), x[:-4] if x.endswith('.csv') else x),
"path": os.path.join(full_path, x).replace(env.cellxgene_data, ""), "path": os.path.join(full_path, x).replace(env.cellxgene_data, ""),
} for x in os.listdir(full_path) if x.endswith('.csv') and os.path.isfile(os.path.join(full_path, x))] } for x in sorted(os.listdir(full_path)) if x.endswith('.csv') and os.path.isfile(os.path.join(full_path, x))]
return [{"name":'new', "class":'new', "path":full_path.replace(env.cellxgene_data, "")}] + entries return [{"name":'new', "class":'new', "path":full_path.replace(env.cellxgene_data, "")}] + entries
def make_entry(el): def make_entry(el):
@@ -48,7 +48,7 @@ def recurse_dir(path):
"type": "neither", "type": "neither",
} }
return [make_entry(x) for x in os.listdir(path)] return [make_entry(x) for x in sorted(os.listdir(path))]
def render_entries(entries): def render_entries(entries):