 george-hall-ucl
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19caa6cb80
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Sorry -- forgot to lint
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2023-08-08 16:04:03 +01:00 |
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george-hall-ucl
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56bd079024
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Save gene sets without cell annotations
This fixes a bug whereby new gene_sets csv files created without
accompanying cell-level annotations could not be detected by the
filecrawler.
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2023-08-08 15:49:57 +01:00 |
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Alok Saldanha
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c7c156b4cf
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Merge pull request #77 from aeisenbarth/filter-empty-folders
Filter directories without h5ad files
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2023-07-09 07:04:06 -06:00 |
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Alok Saldanha
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624d1f8567
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#78 Revert "Rename argument "filter" to "subpath""
This reverts commit fdd6cca297.
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2023-07-09 08:25:27 -04:00 |
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Alok Saldanha
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2754bc1ef1
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#81 Combined GATEWAY_ENABLE_ANNOTATIONS and GATEWAY_ENABLE_GENE_SETS flags
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2023-07-06 08:53:19 -06:00 |
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Alok Saldanha
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5a650334df
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#81 moved gene set check into fileitem_source
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2023-07-06 08:18:50 -06:00 |
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Andreas Eisenbarth
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6607b15085
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Exclude directories having no h5ad files
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2022-10-12 17:31:22 +02:00 |
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Andreas Eisenbarth
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fdd6cca297
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Rename argument "filter" to "subpath"
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2022-10-12 13:40:39 +02:00 |
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Alok Saldanha
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a9753c4101
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#59 change s3 cache variable from S3_DISABLE_LISTINGS_CACHE to S3_ENABLE_LISTINGS_CACHE
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2022-03-14 22:36:42 -04:00 |
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Alok Saldanha
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fd48920c5b
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#59 add refresh query param to force refresh of S3 cache
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2022-03-14 21:44:05 -04:00 |
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Alex Rogozhnikov
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3e3bd22512
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add environment variable S3_DISABLE_LISTINGS_CACHE per Alok's request
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2022-03-14 09:59:55 -07:00 |
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Alex Rogozhnikov
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893b2f1af1
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remove listing cache at the level of fs
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2022-03-11 03:20:06 -08:00 |
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Alex Rogozhnikov
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757487b772
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Force reload folder on every request
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2022-03-11 02:43:29 -08:00 |
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Alok Saldanha
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551cb46af8
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#42 add support for is_authorized hook
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2021-11-14 17:28:10 -05:00 |
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Alok Saldanha
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0375a717c9
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#50 fixed bug in listing subdirs
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2021-07-18 09:04:36 -04:00 |
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Alok Saldanha
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a3e3b6cea8
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#45 implemented test__scan_directory__properly_recurses_suburls
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2021-04-21 08:21:46 -04:00 |
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Alok Saldanha
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d072034911
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#45 pass filter into scan_directory
also include filterpart in heading
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2021-04-20 06:03:16 -04:00 |
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Alok Saldanha
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1200629d74
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#45 handle keys as full subpath rather than last path element
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2021-04-20 05:57:48 -04:00 |
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Alok Saldanha
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dd727a9469
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added missing __init__.py
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2021-04-05 08:04:48 -04:00 |
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Alok Saldanha
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d2d22cecaa
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updated tests, formatting
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2021-04-02 11:52:49 -04:00 |
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Alok Saldanha
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b1ae9e8ce8
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ensure s3 bucket does not include trailing slash
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2021-04-02 11:37:11 -04:00 |
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Alok Saldanha
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76c1d9e80c
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removed .csv suffix from annotation name
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2021-03-29 07:28:16 -04:00 |
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Alok Saldanha
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586dc6623a
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ensure annotation directory for new annotations
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2021-03-29 07:03:05 -04:00 |
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Alok Saldanha
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76f3939fdd
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rebased "Introduction of ItemSource interface" patch
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2021-03-28 22:05:08 -04:00 |
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