mirror of
https://github.com/Novartis/cellxgene-gateway.git
synced 2026-09-22 19:38:11 +08:00
Alok Saldanha
c03098af17
Due to issue with opening annotation files with "-" in the name, this doesn't quite work.
30 lines
1.4 KiB
Python
30 lines
1.4 KiB
Python
# Copyright 2019 Novartis Institutes for BioMedical Research Inc. Licensed
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# under the Apache License, Version 2.0 (the "License"); you may not use
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# this file except in compliance with the License. You may obtain a copy
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# of the License at http://www.apache.org/licenses/LICENSE-2.0. Unless
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# required by applicable law or agreed to in writing, software distributed
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# under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES
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# OR CONDITIONS OF ANY KIND, either express or implied. See the License for
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# the specific language governing permissions and limitations under the License.
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import os
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from flask_api import status
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from cellxgene_gateway import env
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from cellxgene_gateway.cellxgene_exception import CellxgeneException
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# There are three kinds of CacheKey:
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# 1) somedir/dataset.h5ad: a dataset
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# in this case, pathpart == dataset == 'somedir/dataset.h5ad'
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# 2) somedir/dataset_annotations/saldaal1-T5HMVBNV.csv : an actual annotaitons file.
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# in this case, pathpart == 'dataset_annotations/saldaal1-T5HMVBNV.csv', dataset == 'somedir/dataset.h5ad'
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# 3) somedir/dataset_annotations: an annotation directory. The corresponding h5ad must exist, but the directory may not.
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# in this case, pathpart == 'dataset_annotations', dataset == 'somedir/dataset.h5ad'
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class CacheKey:
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def __init__(self, pathpart, dataset, annotation_file):
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self.pathpart = pathpart
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self.dataset = dataset
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self.annotation_file = annotation_file
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