wire e2e gene set loading prototype

server/data_common/data_adaptor.py

@@ -266,6 +266,19 @@ class DataAdaptor(metaclass=ABCMeta):
 
         return labels_df
 
+    def check_new_genesets(self, genesets):
+        """Check gene sets, return if correct, else raise error"""
+
+        # server_config.single_dataset__var_names
+
+        print("<<<<<<<<>>>>>>>>>>> NEED TO IMPLEMENT check_new_genesets")
+        # XXX TODO -
+        # 1. check that all gs names are legal & non-duplicative.
+        # 2. check that all genes exist in var.index or var-index
+        # 3. de-dup genes
+
+        return genesets
+
     def data_frame_to_fbs_matrix(self, filter, axis):
         """
         Retrieves data 'X' and returns in a flatbuffer Matrix.
@@ -338,7 +351,7 @@ class DataAdaptor(metaclass=ABCMeta):
     @staticmethod
     def normalize_embedding(embedding):
         """Normalize embedding layout to meet client assumptions.
-           Embedding is an ndarray, shape (n_obs, n)., where n is normally 2
+        Embedding is an ndarray, shape (n_obs, n)., where n is normally 2
         """
 
         # scale isotropically