mirror of
https://github.com/chanzuckerberg/cellxgene.git
synced 2026-10-08 14:08:13 +08:00
render diffexp as geneset
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@@ -4,9 +4,7 @@ import React from "react";
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import _ from "lodash";
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import _ from "lodash";
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import { connect } from "react-redux";
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import { connect } from "react-redux";
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import { Button } from "@blueprintjs/core";
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import { Button } from "@blueprintjs/core";
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import HistogramBrush from "../brushableHistogram";
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import GeneSet from "./geneSet";
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import GeneSet from "./geneSet";
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import AddGenes from "./menus/addGenes";
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import testGeneSets from "./test_data";
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import testGeneSets from "./test_data";
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import CreateGenesetDialogue from "./menus/createGenesetDialogue";
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import CreateGenesetDialogue from "./menus/createGenesetDialogue";
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@@ -31,13 +29,34 @@ class GeneExpression extends React.Component {
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return sets;
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return sets;
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};
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};
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renderDiffexpGeneSets = () => {
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const { differential } = this.props;
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const setGenes = [];
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if (differential.diffExp) {
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differential.diffExp.forEach((diffexpGene) => {
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setGenes.push(diffexpGene[0]);
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});
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}
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console.log(differential.diffExp);
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return differential.diffExp ? (
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<GeneSet
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key="Temp DiffExp Set"
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setGenes={setGenes}
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setName="Temp DiffExp Set"
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/>
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) : null;
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};
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handleActivateCreateGenesetMode = () => {
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handleActivateCreateGenesetMode = () => {
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const { dispatch } = this.props;
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const { dispatch } = this.props;
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dispatch({ type: "geneset: activate add new geneset mode" });
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dispatch({ type: "geneset: activate add new geneset mode" });
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};
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};
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render() {
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render() {
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const { userDefinedGenes, differential } = this.props;
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const geneSetsFeatureEnabledTODO = true;
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const geneSetsFeatureEnabledTODO = true;
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return (
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return (
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<div>
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<div>
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@@ -54,37 +73,8 @@ class GeneExpression extends React.Component {
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</div>
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</div>
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) : null}
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) : null}
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<CreateGenesetDialogue />
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<CreateGenesetDialogue />
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<AddGenes />
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{userDefinedGenes.length > 0
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? _.map(userDefinedGenes, (geneName, index) => {
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return (
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<HistogramBrush
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key={geneName}
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field={geneName}
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zebra={index % 2 === 0}
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isUserDefined
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/>
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);
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})
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: null}
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</div>
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<div>
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{differential.diffExp
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? _.map(differential.diffExp, (value, index) => {
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return (
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<HistogramBrush
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key={value[0]}
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field={value[0]}
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zebra={index % 2 === 0}
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isDiffExp
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logFoldChange={value[1]}
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pval={value[2]}
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pvalAdj={value[3]}
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/>
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);
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})
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: null}
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</div>
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</div>
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<div>{this.renderDiffexpGeneSets()}</div>
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<div>{this.renderTestGeneSets()}</div>
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<div>{this.renderTestGeneSets()}</div>
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</div>
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</div>
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);
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);
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