mirror of
https://github.com/chanzuckerberg/cellxgene.git
synced 2026-10-08 23:08:12 +08:00
Add reload back in (#808)
This commit is contained in:
+31
-28
@@ -1,4 +1,5 @@
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# flake8: noqa F403, F405
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# flake8: noqa F403, F405
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from functools import partialmethod
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from multiprocessing import Pipe, Process
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from multiprocessing import Pipe, Process
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from os.path import splitext, basename
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from os.path import splitext, basename
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import sys
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import sys
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@@ -26,11 +27,9 @@ class MainWindow(QMainWindow):
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super(MainWindow, self).__init__(None)
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super(MainWindow, self).__init__(None)
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self.cef_widget = None
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self.cef_widget = None
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self.data_widget = None
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self.data_widget = None
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self.parent_conn, self.child_conn = Pipe()
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self.parent_conn, self.child_conn = None, None
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self.load_emitter = Emitter(self.parent_conn, WorkerSignals)
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self.load_emitter = None
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self.load_emitter.signals.error.connect(self.restartOnError)
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self.emitter_thread = None
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self.emitter_thread = threading.Thread(target=self.load_emitter.run, daemon=True)
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self.emitter_thread.start()
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self.worker = None
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self.worker = None
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self.url = f"http://localhost:{GUI_PORT}/"
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self.url = f"http://localhost:{GUI_PORT}/"
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self.setWindowTitle("cellxgene")
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self.setWindowTitle("cellxgene")
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@@ -38,12 +37,10 @@ class MainWindow(QMainWindow):
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# Strong focus - accepts focus by tab & click
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# Strong focus - accepts focus by tab & click
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self.setFocusPolicy(Qt.StrongFocus)
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self.setFocusPolicy(Qt.StrongFocus)
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self.setupLayout()
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self.setupLayout()
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# self.setupMenu()
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self.setupMenu()
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def restartOnError(self):
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def restartOnError(self):
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if self.worker:
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self.window().shutdownServer()
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self.worker.terminate()
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self.parent_conn.close()
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# close emitter on error/finished
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# close emitter on error/finished
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self.parent_conn, self.child_conn = Pipe()
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self.parent_conn, self.child_conn = Pipe()
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self.load_emitter = Emitter(self.parent_conn, WorkerSignals)
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self.load_emitter = Emitter(self.parent_conn, WorkerSignals)
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@@ -85,6 +82,21 @@ class MainWindow(QMainWindow):
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self.cef_widget.hidden_window, parent=self)
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self.cef_widget.hidden_window, parent=self)
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self.stacked_layout.addWidget(self.container, 1, 0)
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self.stacked_layout.addWidget(self.container, 1, 0)
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def setupServer(self):
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self.shutdownServer()
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# close emitter on error/finished
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self.parent_conn, self.child_conn = Pipe()
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self.load_emitter = Emitter(self.parent_conn, WorkerSignals)
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self.emitter_thread = threading.Thread(target=self.load_emitter.run, daemon=True)
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self.emitter_thread.start()
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# send to load with error message?
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def shutdownServer(self):
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if self.worker:
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self.worker.terminate()
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if self.parent_conn:
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self.parent_conn.close()
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def setupMenu(self):
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def setupMenu(self):
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# TODO add communication to subprocess on reload
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# TODO add communication to subprocess on reload
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main_menu = self.menuBar()
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main_menu = self.menuBar()
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@@ -171,10 +183,11 @@ class LoadWidget(QFrame):
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self.embedding_selection = [MODES[idx]]
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self.embedding_selection = [MODES[idx]]
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def createScanpyEngine(self, file_name):
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def createScanpyEngine(self, file_name):
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self.window().setupServer()
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worker = Worker(self.window().parent_conn, self.window().child_conn, file_name, self.title, host="127.0.0.1", port=GUI_PORT,
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worker = Worker(self.window().parent_conn, self.window().child_conn, file_name, self.title, host="127.0.0.1", port=GUI_PORT,
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layout=self.embedding_selection)
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layout=self.embedding_selection)
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self.window().load_emitter.signals.ready.connect(self.onDataReady)
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self.window().load_emitter.signals.ready.connect(self.onDataReady)
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self.window().load_emitter.signals.engine_error.connect(self.onEngineError)
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self.window().load_emitter.signals.engine_error.connect(self.onServerError)
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self.window().load_emitter.signals.server_error.connect(self.onServerError)
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self.window().load_emitter.signals.server_error.connect(self.onServerError)
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# Error is generic error from emitter
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# Error is generic error from emitter
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self.window().load_emitter.signals.error.connect(self.onServerError)
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self.window().load_emitter.signals.error.connect(self.onServerError)
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@@ -196,7 +209,7 @@ class LoadWidget(QFrame):
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def onDataReady(self):
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def onDataReady(self):
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self.site_ready_worker = SiteReadyWorker(self.window().url)
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self.site_ready_worker = SiteReadyWorker(self.window().url)
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self.site_ready_worker.signals.ready.connect(self.onServerReady)
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self.site_ready_worker.signals.ready.connect(self.onServerReady)
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self.site_ready_worker.signals.error.connect(self.onDataError)
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self.site_ready_worker.signals.error.connect(self.onError)
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srw_thread = threading.Thread(target=self.site_ready_worker.run, daemon=True)
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srw_thread = threading.Thread(target=self.site_ready_worker.run, daemon=True)
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srw_thread.start()
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srw_thread.start()
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@@ -206,26 +219,17 @@ class LoadWidget(QFrame):
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self.window().cef_widget.browser.Navigate(self.window().url)
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self.window().cef_widget.browser.Navigate(self.window().url)
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self.window().stacked_layout.setCurrentIndex(1)
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self.window().stacked_layout.setCurrentIndex(1)
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def onServerError(self, err):
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def onError(self, err, server_error=False):
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# Restart worker
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# Restart worker
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self.serverError = True
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if server_error:
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# Report error and switch to load screen
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self.serverError = True
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self.window().restartOnError()
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# Report error and switch to load screen
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self.window().shutdownServer()
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self.window().stacked_layout.setCurrentIndex(0)
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self.window().stacked_layout.setCurrentIndex(0)
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self.error_label.setText(f"Error: {err}")
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self.error_label.setText(f"Error: {err}")
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self.error_label.resize(self.MAX_CONTENT_WIDTH, self.error_label.height())
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self.error_label.resize(self.MAX_CONTENT_WIDTH, self.error_label.height())
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def onEngineError(self, err):
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onServerError = partialmethod(onError, server_error=True)
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self.window().restartOnError()
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self.window().stacked_layout.setCurrentIndex(0)
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self.error_label.setText(f"Error: {err}")
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self.error_label.resize(self.MAX_CONTENT_WIDTH, self.error_label.height())
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def onDataError(self, err):
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self.window().restartOnError()
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self.window().stacked_layout.setCurrentIndex(0)
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self.error_label.setText(f"Error: {err}")
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self.error_label.resize(self.MAX_CONTENT_WIDTH, self.error_label.height())
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def main():
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def main():
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@@ -252,8 +256,7 @@ def main():
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if not cef.GetAppSetting("external_message_pump"):
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if not cef.GetAppSetting("external_message_pump"):
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app.stopTimer()
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app.stopTimer()
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if main_window.worker:
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main_window.shutdownServer()
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main_window.worker.terminate()
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del main_window # Just to be safe, similarly to "del app"
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del main_window # Just to be safe, similarly to "del app"
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del app # Must destroy app object before calling Shutdown
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del app # Must destroy app object before calling Shutdown
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cef.Shutdown()
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cef.Shutdown()
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