mirror of
https://github.com/chanzuckerberg/cellxgene.git
synced 2026-09-30 03:48:12 +08:00
Redux refactor (#1571)
* refactor categorical controls state * lint * fix race condition in tests * fix typo * add missing update on subset * remove obsolete code * update jest and puppeteer major version; update all minors * update when label changes * remove lint from tests; increase timeouts in e2e tests * initial refactoring to new async annomatrix * refine error handling * fix bad merge * add continuous legend * lint * fix memoization in color table creators * partial implementation of user defined annotations * add new annotations action creator file * first pass at user annotations * additional user annotation bug fixes * user annotation auto-save * unit test cleanup * lint * refactor into multiple files * cleanup * add column GC * fix several bugs in user annotations * remove debug code * no anonymous functions * undo redo cleanup * file cleanup * scatterplot * performance * cleanup * remove old code * render in parallel with load * fix race condition * simply graph rendering * render throttle DRY * fix category label order * fix typo in e2e test setup * re-fix the e2e test setup * be more tolerant of races * anno matrix unit tests * temp disable reembedding * pilot port continuous histo to react-async * name change * lint * fix repaint bug * typo fix * update snap to match new ids * world/universe name cleanup * move annoMatrix to src dir * use private underscore naming convention * fix corner case in all selected * name cleanup * add layout control * init edge case * lint * port scatterplot * fix label indexing bug and improve tests * port category to react-async * fix user annotation labelling while subset * select all of prev layout on layout switch * fix race with crossfilter update * prettier lint * fix misleading comment * fix url composition in loader * first pass at crossfilter tests * lint * lint * fix typo * improved error handling for network errors * fix memoization bug * add memo * refactor for performnce * add missing single-value handling in select exact parser * small bugs discovered by tests * lint * additional crossfilter unit tests * remove extraneous comment * add support for automatic category determination * lint * fix render bug in category * take advantage of schema categories guarantee * lint * do not clear history when resetting * enhanced annomatrix gc * lint * finish renaming to follow conventions; fix clone race bug * lint * add priority based loading to improve initial data load UX * crossfilter cache perf * perf tuning * remove timers * documentation * PR review changes * PR review changes * more PR review edits * improve clarity of comment * more PR review fixes * port centroidLabels to use react-async * remove dead code * pr review updates * oops, remove logging
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@@ -1,97 +1,28 @@
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// jshint esversion: 6
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/* rc slider https://www.npmjs.com/package/rc-slider */
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import React from "react";
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import { connect } from "react-redux";
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import { Button } from "@blueprintjs/core";
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import * as globals from "../../globals";
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import HistogramBrush from "../brushableHistogram";
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@connect((state) => ({
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obsAnnotations: state.world?.obsAnnotations,
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colorAccessor: state.colors.colorAccessor,
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colorScale: state.colors.scale,
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schema: state.world?.schema,
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schema: state.annoMatrix?.schema,
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}))
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class Continuous extends React.PureComponent {
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static renderIsStillLoading(zebra, key) {
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return (
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<div
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key={key}
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style={{
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padding: globals.leftSidebarSectionPadding,
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backgroundColor: zebra % 2 === 0 ? globals.lightestGrey : "white",
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}}
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>
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<div
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style={{
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display: "flex",
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justifyContent: "space-between",
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justifyItems: "center",
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alignItems: "center",
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}}
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>
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<div style={{ minWidth: 30 }} />
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<div style={{ display: "flex", alignSelf: "center" }}>
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<span style={{ fontStyle: "italic" }}>{key}</span>
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</div>
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<div
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style={{
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display: "flex",
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justifyContent: "flex-end",
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}}
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>
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<Button minimal loading intent="primary" />
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</div>
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</div>
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</div>
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);
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}
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render() {
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const { obsAnnotations, schema } = this.props;
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/* initial value for iterator to simulate index, ranges is an object */
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const { schema } = this.props;
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if (!schema) return null;
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const obsIndex = schema.annotations.obs.index;
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const allContinuousNames = schema.annotations.obs.columns
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.filter((col) => col.type === "int32" || col.type === "float32")
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.filter((col) => col.name !== obsIndex)
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.map((col) => col.name);
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/* initial value for iterator to simulate index, ranges is an object */
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let zebra = 0;
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return (
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<div>
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{allContinuousNames.map((key) => {
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if (!obsAnnotations.hasCol(key)) {
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// still loading!
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zebra += 1;
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return Continuous.renderIsStillLoading(zebra, key);
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}
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// data loaded and available
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const summary = obsAnnotations.col(key).summarize();
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const nonFiniteExtent =
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summary.min === undefined ||
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summary.max === undefined ||
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Number.isNaN(summary.min) ||
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Number.isNaN(summary.max);
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if (!summary.categorical && !nonFiniteExtent) {
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zebra += 1;
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return (
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<HistogramBrush
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key={key}
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field={key}
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isObs
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zebra={zebra % 2 === 0}
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ranges={summary}
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/>
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);
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}
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return null;
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})}
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{allContinuousNames.map((key, zebra) => (
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<HistogramBrush key={key} field={key} isObs zebra={zebra % 2 === 0} />
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))}
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</div>
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);
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}
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