Redux refactor (#1571)

* refactor categorical controls state

* lint

* fix race condition in tests

* fix typo

* add missing update on subset

* remove obsolete code

* update jest and puppeteer major version; update all minors

* update when label changes

* remove lint from tests; increase timeouts in e2e tests

* initial refactoring to new async annomatrix

* refine error handling

* fix bad merge

* add continuous legend

* lint

* fix memoization in color table creators

* partial implementation of user defined annotations

* add new annotations action creator file

* first pass at user annotations

* additional user annotation bug fixes

* user annotation auto-save

* unit test cleanup

* lint

* refactor into multiple files

* cleanup

* add column GC

* fix several bugs in user annotations

* remove debug code

* no anonymous functions

* undo redo cleanup

* file cleanup

* scatterplot

* performance

* cleanup

* remove old code

* render in parallel with load

* fix race condition

* simply graph rendering

* render throttle DRY

* fix category label order

* fix typo in e2e test setup

* re-fix the e2e test setup

* be more tolerant of races

* anno matrix unit tests

* temp disable reembedding

* pilot port continuous histo to react-async

* name change

* lint

* fix repaint bug

* typo fix

* update snap to match new ids

* world/universe name cleanup

* move annoMatrix to src dir

* use private underscore naming convention

* fix corner case in all selected

* name cleanup

* add layout control

* init edge case

* lint

* port scatterplot

* fix label indexing bug and improve tests

* port category to react-async

* fix user annotation labelling while subset

* select all of prev layout on layout switch

* fix race with crossfilter update

* prettier lint

* fix misleading comment

* fix url composition in loader

* first pass at crossfilter tests

* lint

* lint

* fix typo

* improved error handling for network errors

* fix memoization bug

* add memo

* refactor for performnce

* add missing single-value handling in select exact parser

* small bugs discovered by tests

* lint

* additional crossfilter unit tests

* remove extraneous comment

* add support for automatic category determination

* lint

* fix render bug in category

* take advantage of schema categories guarantee

* lint

* do not clear history when resetting

* enhanced annomatrix gc

* lint

* finish renaming to follow conventions; fix clone race bug

* lint

* add priority based loading to improve initial data load UX

* crossfilter cache perf

* perf tuning

* remove timers

* documentation

* PR review changes

* PR review changes

* more PR review edits

* improve clarity of comment

* more PR review fixes

* port centroidLabels to use react-async

* remove dead code

* pr review updates

* oops, remove logging

client/src/components/geneExpression/index.js

@@ -1,4 +1,3 @@
-// jshint esversion: 6
 /* rc slider https://www.npmjs.com/package/rc-slider */
 
 import React from "react";
@@ -10,23 +9,13 @@ import AddGenes from "./addGenes";
 
 @connect((state) => {
   return {
-    obsAnnotations: state.world?.obsAnnotations,
     userDefinedGenes: state.controls.userDefinedGenes,
-    userDefinedGenesLoading: state.controls.userDefinedGenesLoading,
-    world: state.world,
-    colorAccessor: state.colors.colorAccessor,
     differential: state.differential,
   };
 })
 class GeneExpression extends React.Component {
   render() {
-    const { world, userDefinedGenes, differential } = this.props;
-    const varIndexName = world?.schema?.annotations?.var?.index;
-    const varIndex = world?.varAnnotations?.col(varIndexName)?.asArray();
-
-    // may still be loading!
-    if (!varIndex) return null;
-
+    const { userDefinedGenes, differential } = this.props;
     return (
       <div
         style={{
@@ -35,19 +24,13 @@ class GeneExpression extends React.Component {
       >
         <div>
           <AddGenes />
-          {world && userDefinedGenes.length > 0
+          {userDefinedGenes.length > 0
             ? _.map(userDefinedGenes, (geneName, index) => {
-                const values = world.varData.col(geneName);
-                if (!values) {
-                  return null;
-                }
-                const summary = values.summarize();
                 return (
                   <HistogramBrush
                     key={geneName}
                     field={geneName}
                     zebra={index % 2 === 0}
-                    ranges={summary}
                     isUserDefined
                   />
                 );
@@ -57,18 +40,11 @@ class GeneExpression extends React.Component {
         <div>
           {differential.diffExp
             ? _.map(differential.diffExp, (value, index) => {
-                const name = world.varAnnotations.at(value[0], varIndexName);
-                const values = world.varData.col(name);
-                if (!values) {
-                  return null;
-                }
-                const summary = values.summarize();
                 return (
                   <HistogramBrush
-                    key={name}
-                    field={name}
+                    key={value[0]}
+                    field={value[0]}
                     zebra={index % 2 === 0}
-                    ranges={summary}
                     isDiffExp
                     logFoldChange={value[1]}
                     pval={value[2]}