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add GET routes for expression data (#1387)

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* add GET routes for expression data

* fix comment typo
This commit is contained in:
Bruce Martin
2020-04-13 11:28:35 -07:00
committed by GitHub
parent 98c2a1359b
commit 136093d583
7 changed files with 323 additions and 139 deletions
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server/test/test_api.py
+20
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@@ -206,6 +206,13 @@ class EndPoints(object):
result = self.session.put(url, headers=header)
self.assertEqual(result.status_code, HTTPStatus.BAD_REQUEST)
def test_data_get_fbs(self):
endpoint = f"data/var"
url = f"{self.URL_BASE}{endpoint}"
header = {"Accept": "application/octet-stream"}
result = self.session.get(url, headers=header)
self.assertEqual(result.status_code, HTTPStatus.BAD_REQUEST)
def test_data_put_filter_fbs(self):
endpoint = f"data/var"
url = f"{self.URL_BASE}{endpoint}"
@@ -222,6 +229,19 @@ class EndPoints(object):
self.assertEqual(len(df["columns"]), df["n_cols"])
self.assertListEqual(df["col_idx"].tolist(), [0, 1, 4])
def test_data_get_filter_fbs(self):
index_col_name = self.schema["schema"]["annotations"]["var"]["index"]
query = f"var:{index_col_name}=SIK1"
endpoint = f"data/var"
url = f"{self.URL_BASE}{endpoint}?{query}"
header = {"Accept": "application/octet-stream"}
result = self.session.get(url, headers=header)
self.assertEqual(result.status_code, HTTPStatus.OK)
self.assertEqual(result.headers["Content-Type"], "application/octet-stream")
df = decode_fbs.decode_matrix_FBS(result.content)
self.assertEqual(df["n_rows"], 2638)
self.assertEqual(df["n_cols"], 1)
def test_data_put_single_var(self):
endpoint = f"data/var"
url = f"{self.URL_BASE}{endpoint}"