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experimental re-embedding (#1186)
* first cut at re-embedding route and back-end support * update and expand config route tests * add scanpy_umap * add reembedding to config route parameters * front-end support for reembedding fetch and UI * remove unused imports * add loading state * save reembedding in reducer state * improve withColsFrom * transmit reembed schema to client; pick unique embedding names * display embeddings * format * lint * spaces, tab size 2 * lint * test hack for smoke-test race * back out hack sleep * add check for backed mode * add unit test for reembedding * lint * hide re-embedding CLI param from help
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@@ -21,6 +21,7 @@ import autosave from "./autosave";
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import ontology from "./ontology";
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import centroidLabels from "./centroidLabels";
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import pointDialation from "./pointDilation";
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import { reembedController, reembedding } from "./reembed";
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import undoableConfig from "./undoableConfig";
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@@ -31,6 +32,7 @@ const Reducer = undoable(
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["world", world],
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["ontology", ontology],
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["annotations", annotations],
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["reembedding", reembedding],
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["layoutChoice", layoutChoice],
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["categoricalSelection", categoricalSelection],
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["continuousSelection", continuousSelection],
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@@ -42,6 +44,7 @@ const Reducer = undoable(
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["responsive", responsive],
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["centroidLabels", centroidLabels],
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["pointDilation", pointDialation],
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["reembedController", reembedController],
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["autosave", autosave],
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["resetCache", resetCache]
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]),
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@@ -57,7 +60,8 @@ const Reducer = undoable(
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"differential",
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"layoutChoice",
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"centroidLabels",
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"annotations"
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"annotations",
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"reembedding"
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],
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undoableConfig
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);
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