fork/cellxgene
1
0
Fork 0
mirror of https://github.com/chanzuckerberg/cellxgene.git synced 2026-10-08 19:38:11 +08:00
Code Issues Packages Projects Releases Wiki Activity

fix for incorrect stats computation in diff exp t-test (#2318)

Browse Source 
* 2211 fixes

* lint

* lint

* add missing test and bug found by test

* change terminology for count distribution

* update scanpy requirement

* update scanpy requirement
This commit is contained in:
Bruce Martin
2021-07-23 11:36:26 -07:00
committed by GitHub
parent 1ebde2213d
commit 1ea2b7fe80
28 changed files with 336 additions and 90 deletions
Download Patch File Download Diff File Expand all files Collapse all files
backend/czi_hosted/requirements.txt
+2 -2
View File
@@ -1,4 +1,4 @@
anndata>=0.7.0
anndata>=0.7.6 # we use to_memory(), added in 0.7.6
boto3>=1.12.18
click>=7.1.2
Flask>=1.0.2,<2.0.0 # Flask 2.0 is not compatible with the latest version of Flask-RESTful (0.3.8)
@@ -11,7 +11,7 @@ flatbuffers>=1.11.0,<2.0.0 # cellxgene is not compatible with 2.0.0. Requires mi
flatten-dict>=0.2.0
fsspec>=0.4.4,<0.8.0
gunicorn>=20.0.4
h5py<3.0.0 # h5py>=3.0.0 had a breaking change; there is a fix in anndata>=0.7.5
h5py>=3.0.0
numba>=0.49.1,<0.53.0
numpy>=1.15.0
packaging>=20.0