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fix: set count to 15 for testing (#2324)

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This commit is contained in:
Severiano Badajoz
2021-07-21 22:56:22 +00:00
committed by GitHub
parent bbf1950624
commit 1ebde2213d
1 changed files with 8 additions and 6 deletions
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backend/test/test_czi_hosted/unit/common/test_api.py
+8 -6
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@@ -119,6 +119,8 @@ class EndPoints(BaseTest):
result = self.client.get(url, headers=header) result = self.client.get(url, headers=header)
self.assertEqual(result.status_code, HTTPStatus.BAD_REQUEST) self.assertEqual(result.status_code, HTTPStatus.BAD_REQUEST)
# TEMP: Testing count 15 to match hardcoded values for diffexp
# TODO(#1281): Switch back to dynamic values
def test_diff_exp(self): def test_diff_exp(self):
endpoint = "diffexp/obs" endpoint = "diffexp/obs"
url = f"{self.TEST_URL_BASE}{endpoint}" url = f"{self.TEST_URL_BASE}{endpoint}"
@@ -126,21 +128,21 @@ class EndPoints(BaseTest):
"mode": "topN", "mode": "topN",
"set1": {"filter": {"obs": {"annotation_value": [{"name": "louvain", "values": ["NK cells"]}]}}}, "set1": {"filter": {"obs": {"annotation_value": [{"name": "louvain", "values": ["NK cells"]}]}}},
"set2": {"filter": {"obs": {"annotation_value": [{"name": "louvain", "values": ["CD8 T cells"]}]}}}, "set2": {"filter": {"obs": {"annotation_value": [{"name": "louvain", "values": ["CD8 T cells"]}]}}},
"count": 7, "count": 15,
} }
result = self.client.post(url, json=params) result = self.client.post(url, json=params)
self.assertEqual(result.status_code, HTTPStatus.OK) self.assertEqual(result.status_code, HTTPStatus.OK)
self.assertEqual(result.headers["Content-Type"], "application/json") self.assertEqual(result.headers["Content-Type"], "application/json")
result_data = json.loads(result.data) result_data = json.loads(result.data)
self.assertEqual(len(result_data['positive']), 7) self.assertEqual(len(result_data['positive']), 15)
self.assertEqual(len(result_data['negative']), 7) self.assertEqual(len(result_data['negative']), 15)
def test_diff_exp_indices(self): def test_diff_exp_indices(self):
endpoint = "diffexp/obs" endpoint = "diffexp/obs"
url = f"{self.TEST_URL_BASE}{endpoint}" url = f"{self.TEST_URL_BASE}{endpoint}"
params = { params = {
"mode": "topN", "mode": "topN",
"count": 10, "count": 15,
"set1": {"filter": {"obs": {"index": [[0, 500]]}}}, "set1": {"filter": {"obs": {"index": [[0, 500]]}}},
"set2": {"filter": {"obs": {"index": [[500, 1000]]}}}, "set2": {"filter": {"obs": {"index": [[500, 1000]]}}},
} }
@@ -148,8 +150,8 @@ class EndPoints(BaseTest):
self.assertEqual(result.status_code, HTTPStatus.OK) self.assertEqual(result.status_code, HTTPStatus.OK)
self.assertEqual(result.headers["Content-Type"], "application/json") self.assertEqual(result.headers["Content-Type"], "application/json")
result_data = json.loads(result.data) result_data = json.loads(result.data)
self.assertEqual(len(result_data['positive']), 10) self.assertEqual(len(result_data['positive']), 15)
self.assertEqual(len(result_data['negative']), 10) self.assertEqual(len(result_data['negative']), 15)
def test_get_annotations_var_fbs(self): def test_get_annotations_var_fbs(self):
endpoint = "annotations/var" endpoint = "annotations/var"