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updates the roadmap & reorganizes the README (#712)

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Justin Kiggins
2019-04-18 13:10:03 -07:00
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parent b878b0f93c
commit 1f735abe2b
7 changed files with 221 additions and 219 deletions
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docs/index.md
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@@ -2,15 +2,15 @@ _cellxgene_ is an interactive data explorer for single-cell transcriptomics data
## features
#### Flexible selections, coloring, and differential expression of your selected sets of cells
#### flexible selections, coloring, and differential expression of your selected sets of cells
<img src="diffexp.gif" width="600"/>
#### Single-gene analyses (e.g. expression analysis)
#### single-gene analyses (e.g. expression analysis)
<img src="customGene.gif" width="600" />
## getting started
## quick start
_cellxgene_ **only** supports Python 3.6. We recommend [installing _cellxgene_ into a conda or virtual environment.](/faq.html#how-do-i-create-a-python-36-environment-for-cellxgene)
To install _cellxgene_ you need Python 3.6+. We recommend [installing _cellxgene_ into a conda or virtual environment.](/faq.html#how-do-i-create-a-python-environment-for-cellxgene)
Install the package.
``` bash
@@ -25,13 +25,17 @@ curl -o pbmc3k.h5ad https://raw.githubusercontent.com/chanzuckerberg/cellxgene/m
Launch _cellxgene_
``` bash
cellxgene launch pbmc3k.h5ad
cellxgene launch pbmc3k.h5ad --open
```
To explore more datasets already formatted for _cellxgene_, see [Data](data) or
visit [Getting Started](getting-started) to learn more about formatting your own
data for _cellxgene_.
## getting help
We'd love to hear from you!
For questions, suggestions, or accolades, [join the `#cellxgene-users` channel on the CZI Science Slack](https://join-cziscience-slack.herokuapp.com/) and say "hi!".
For questions, suggestions, or accolades, [join the `#cellxgene-users` channel on the CZI Science Slack](https://join-cellxgene-users.herokuapp.com/) and say "hi!".
For any errors, [report bugs on Github](https://github.com/chanzuckerberg/cellxgene/issues).