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feat: diffexp returns two genesets (#2230)
* feat: return two lists for diffexp (#2221) * sp * split out derive sort order, tests passing * sp * return diff exp results in two lists * update * copy implementation over to desktop * add tests for two lists * small fixes to complete backend implementation * accept new diffexp response * map diff exp response to genesets * delete ) * name diffexp genesets with population names * take constants out of state and allow width prop to override * shorten mini-histo properly truncate and resize depending on expansion * prepend new genesets * rename data within diffexp action * backend * move diffexp ttest to common code module, update tests * update for unit tests * reference actual var Co-authored-by: Madison Dunitz <madison.dunitz@chanzuckerberg.com> Co-authored-by: Madison Dunitz <dunitzm@gmail.com>
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Madison Dunitz
Madison Dunitz
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7ed53c0f5b
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28b526b3fc
@@ -414,7 +414,8 @@ class EndPointsAnndata(unittest.TestCase, EndPoints):
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self.assertEqual(result.status_code, HTTPStatus.OK)
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self.assertEqual(result.headers["Content-Type"], "application/json")
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result_data = result.json()
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self.assertEqual(len(result_data), 7)
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self.assertEqual(len(result_data['positive']), 7)
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self.assertEqual(len(result_data['negative']), 7)
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def test_diff_exp_indices(self):
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endpoint = "diffexp/obs"
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@@ -429,7 +430,8 @@ class EndPointsAnndata(unittest.TestCase, EndPoints):
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self.assertEqual(result.status_code, HTTPStatus.OK)
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self.assertEqual(result.headers["Content-Type"], "application/json")
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result_data = result.json()
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self.assertEqual(len(result_data), 10)
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self.assertEqual(len(result_data['positive']), 10)
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self.assertEqual(len(result_data['negative']), 10)
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def test_get_summaryvar(self):
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index_col_name = self.schema["schema"]["annotations"]["var"]["index"]
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