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https://github.com/chanzuckerberg/cellxgene.git
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namespacing
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@@ -2,6 +2,7 @@
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import _ from "lodash";
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import * as kvCache from "./keyvalcache";
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import { layoutDimensionName, obsAnnoDimensionName } from "../nameCreators";
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/*
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World is a subset of universe. Most code should use world, and should
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@@ -296,13 +297,14 @@ export function createVarDimension(
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crossfilter,
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geneName
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) {
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const { varDataCache, worldObsIndex } = world;
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const { worldObsIndex } = world;
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const varData = _worldVarDataCache[geneName];
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const worldIndex = worldObsIndex ? idx => worldObsIndex[idx] : idx => idx;
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return crossfilter.dimension(r => {
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return varData[worldIndex(r.__index__)];
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}, Float32Array);
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return crossfilter.dimension(
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r => varData[worldIndex(r.__index__)],
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Float32Array
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);
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}
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export function createObsDimensionMap(crossfilter, world) {
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@@ -317,7 +319,10 @@ export function createObsDimensionMap(crossfilter, world) {
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(result, anno) => {
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const dimType = deduceDimensionType(anno, anno.name);
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if (dimType) {
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result[anno.name] = crossfilter.dimension(r => r[anno.name], dimType);
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result[obsAnnoDimensionName(anno.name)] = crossfilter.dimension(
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r => r[anno.name],
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dimType
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);
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} // else ignore the annotation
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},
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{}
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@@ -327,11 +332,11 @@ export function createObsDimensionMap(crossfilter, world) {
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Add crossfilter dimensions allowing filtering on layout
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*/
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const worldIndex = worldObsIndex ? idx => worldObsIndex[idx] : idx => idx;
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dimensionMap.x = crossfilter.dimension(
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dimensionMap[layoutDimensionName("X")] = crossfilter.dimension(
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r => obsLayout.X[worldIndex(r.__index__)],
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Float32Array
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);
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dimensionMap.y = crossfilter.dimension(
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dimensionMap[layoutDimensionName("Y")] = crossfilter.dimension(
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r => obsLayout.Y[worldIndex(r.__index__)],
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Float32Array
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);
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