From 3f0bb2ce1d113788ac9b342a00c7acea6782b102 Mon Sep 17 00:00:00 2001
From: Charlotte Weaver <charlottesweaver@gmail.com>
Date: Wed, 8 Aug 2018 15:10:33 -0700
Subject: [PATCH 1/3] Added clean script for cellxgene

---
 bin/clean | 16 ++++++++++++++++
 1 file changed, 16 insertions(+)
 create mode 100755 bin/clean

diff --git a/bin/clean b/bin/clean
new file mode 100755
index 00000000..2765d394
--- /dev/null
+++ b/bin/clean
@@ -0,0 +1,16 @@
+DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" >/dev/null && pwd )"
+CELLXGENE_DIR=$(dirname $DIR)
+
+echo "Uninstalling cellxgene"
+yes | pip uninstall cellxgene
+echo "removing node_modules"
+rm -rf $CELLXGENE_DIR/client/node_modules
+echo "removing client_build"
+rm -rf $CELLXGENE_DIR/client/build
+echo "removing egg-info"
+rm -rf $CELLXGENE_DIR/cellxgene.egg-info
+echo "removing static files"
+rm $CELLXGENE_DIR/server/app/web/templates/index.html
+rm -rf $CELLXGENE_DIR/server/app/web/static
+echo "cellxgene cleanup complete"
+

From d093dc2e3b54295a47168463655cf4897e25376f Mon Sep 17 00:00:00 2001
From: Charlotte Weaver <charlottesweaver@gmail.com>
Date: Wed, 8 Aug 2018 15:17:23 -0700
Subject: [PATCH 2/3] Allow build-client to run anywhere

---
 bin/build-client | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/bin/build-client b/bin/build-client
index 8e51b8db..a4b2c484 100755
--- a/bin/build-client
+++ b/bin/build-client
@@ -1,4 +1,8 @@
 #!/bin/bash
+DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" >/dev/null && pwd )"
+CELLXGENE_DIR=$(dirname $DIR)
+
+cd $CELLXGENE_DIR
 
 npm install --prefix client/ client
 npm run  --prefix client build

From 004303300bfeebc665ef86841eb14291655794a6 Mon Sep 17 00:00:00 2001
From: Charlotte Weaver <charlottesweaver@gmail.com>
Date: Thu, 9 Aug 2018 10:09:19 -0700
Subject: [PATCH 3/3] -f flag for file removal too

---
 bin/clean | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/bin/clean b/bin/clean
index 2765d394..e989035f 100755
--- a/bin/clean
+++ b/bin/clean
@@ -10,7 +10,7 @@ rm -rf $CELLXGENE_DIR/client/build
 echo "removing egg-info"
 rm -rf $CELLXGENE_DIR/cellxgene.egg-info
 echo "removing static files"
-rm $CELLXGENE_DIR/server/app/web/templates/index.html
+rm -f $CELLXGENE_DIR/server/app/web/templates/index.html
 rm -rf $CELLXGENE_DIR/server/app/web/static
 echo "cellxgene cleanup complete"