do not hard-wire column names in annotations (#785)

* enforce column name uniqueness for obs and var

* parameterize the column name containing obs and var user-readable names

* use the new annotation index value from schema

* update f/e unit tests

* PR review suggestions

* lint
This commit is contained in:
Bruce Martin
2019-05-24 21:00:54 -07:00
committed by GitHub
parent a8c2e408d1
commit 3dc45d6330
16 changed files with 246 additions and 155 deletions
@@ -34,28 +34,34 @@ const aSchemaResponse = {
type: "float32"
},
annotations: {
obs: [
{ name: "name", type: "string" },
{ name: "field1", type: "int32" },
{ name: "field2", type: "float32" },
{ name: "field3", type: "boolean" },
{
name: "field4",
type: "categorical",
categories: field4Categories
}
],
var: [
{ name: "name", type: "string" },
{ name: "fieldA", type: "int32" },
{ name: "fieldB", type: "float32" },
{ name: "fieldC", type: "boolean" },
{
name: "fieldD",
type: "categorical",
categories: fieldDCategories
}
]
obs: {
index: "name",
columns: [
{ name: "name", type: "string" },
{ name: "field1", type: "int32" },
{ name: "field2", type: "float32" },
{ name: "field3", type: "boolean" },
{
name: "field4",
type: "categorical",
categories: field4Categories
}
]
},
var: {
index: "name",
columns: [
{ name: "name", type: "string" },
{ name: "fieldA", type: "int32" },
{ name: "fieldB", type: "float32" },
{ name: "fieldC", type: "boolean" },
{
name: "fieldD",
type: "categorical",
categories: fieldDCategories
}
]
}
},
layout: {
obs: [{ name: "umap", type: "float32", dims: ["umap_0", "umap_1"] }],
@@ -53,7 +53,7 @@ describe("createUniverseFromResponse", () => {
expect(universe.obsAnnotations.dims).toEqual([
nObs,
REST.schema.schema.annotations.obs.length
REST.schema.schema.annotations.obs.columns.length
]);
expect(universe.obsLayout.dims).toEqual([nObs, 2]);
expect(universe.obsLayout.colIndex.keys()).toEqual(
@@ -61,7 +61,7 @@ describe("createUniverseFromResponse", () => {
);
expect(universe.varAnnotations.dims).toEqual([
nVar,
REST.schema.schema.annotations.var.length
REST.schema.schema.annotations.var.columns.length
]);
expect(universe.varData.isEmpty()).toBeTruthy();
});
@@ -155,14 +155,18 @@ describe("createObsDimensionMap", () => {
const { crossfilter } = defaultBigBang();
const annotationNames = _.map(
REST.schema.schema.annotations.obs,
REST.schema.schema.annotations.obs.columns,
c => c.name
);
const schemaByObsName = _.keyBy(REST.schema.schema.annotations.obs, "name");
const obsIndexColName = REST.schema.schema.annotations.obs.index;
const schemaByObsName = _.keyBy(
REST.schema.schema.annotations.obs.columns,
"name"
);
expect(crossfilter).toBeDefined();
annotationNames.forEach(name => {
const dim = crossfilter.dimensions[obsAnnoDimensionName(name)];
if (name === "name") {
if (name === obsIndexColName) {
expect(dim).toBeUndefined();
} else {
const { type } = schemaByObsName[name];