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move common code into server, update tests and makefile (#2425)

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* move common code into server, update tests and makefile

remove backend directory, refactor

update smoke tests
This commit is contained in:
Madison Dunitz
2021-09-20 18:50:06 -07:00
committed by GitHub
parent 97caa5bcaa
commit 3ebbb0ccbf
217 changed files with 277 additions and 292 deletions
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test/fixtures/pbmc3k-genesets.csv
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# Test fixture
gene_set_name,gene_set_description,gene_symbol,gene_description
first gene set name,,F5, a gene_description
first gene set name,a description,NO_SUCH_GENE, non-existent gene
first gene set name,a description,F5, duplicate gene
first gene set name, a description,SUMO3,
first gene set name,,SRM,
second_gene_set,,RER1
second_gene_set,,SIK1
third gene set,,NO_SUCH_GENE
fourth_gene_set,fourth description,,gene intentionally missing
fifth_dataset,,,
summary test,,ACD,
summary test,,AATF,
summary test,,F5,
summary test,,PIGU,
geneset_to_delete,,,
geneset_to_edit,,,
fill_this_geneset,,,
empty_this_geneset,,SIK1,
brush_this_gene,,SIK1,
1 # Test fixture
2 gene_set_name,gene_set_description,gene_symbol,gene_description
3 first gene set name,,F5, a gene_description
4 first gene set name,a description,NO_SUCH_GENE, non-existent gene
5 first gene set name,a description,F5, duplicate gene
6 first gene set name, a description,SUMO3,
7 first gene set name,,SRM,
8 second_gene_set,,RER1
9 second_gene_set,,SIK1
10 third gene set,,NO_SUCH_GENE
11 fourth_gene_set,fourth description,,gene intentionally missing
12 fifth_dataset,,,
13 summary test,,ACD,
14 summary test,,AATF,
15 summary test,,F5,
16 summary test,,PIGU,
17 geneset_to_delete,,,
18 geneset_to_edit,,,
19 fill_this_geneset,,,
20 empty_this_geneset,,SIK1,
21 brush_this_gene,,SIK1,