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varindex

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This commit is contained in:
Colin Megill
2021-04-20 01:16:27 -07:00
parent 22d51ab174
commit 5418678b77
2 changed files with 4 additions and 1 deletions
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client/src/components/continuousLegend/index.js
+1
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@@ -116,6 +116,7 @@ class ContinuousLegend extends React.Component {
if (colors !== prevProps?.colors || annoMatrix !== prevProps?.annoMatrix) { if (colors !== prevProps?.colors || annoMatrix !== prevProps?.annoMatrix) {
const { schema } = annoMatrix; const { schema } = annoMatrix;
const { colorMode, colorAccessor, userColors } = colors; const { colorMode, colorAccessor, userColors } = colors;
const colorQuery = createColorQuery( const colorQuery = createColorQuery(
colorMode, colorMode,
colorAccessor, colorAccessor,
client/src/util/stateManager/colorHelpers.js
+3 -1
View File
@@ -14,6 +14,7 @@ fulfill it
*/ */
export function createColorQuery(colorMode, colorByAccessor, schema, genesets) { export function createColorQuery(colorMode, colorByAccessor, schema, genesets) {
if (!colorMode || !colorByAccessor || !schema || !genesets) return null; if (!colorMode || !colorByAccessor || !schema || !genesets) return null;
switch (colorMode) { switch (colorMode) {
case "color by categorical metadata": case "color by categorical metadata":
case "color by continuous metadata": { case "color by continuous metadata": {
@@ -34,10 +35,11 @@ export function createColorQuery(colorMode, colorByAccessor, schema, genesets) {
]; ];
} }
case "color by geneset mean expression": { case "color by geneset mean expression": {
const varIndex = schema?.annotations?.var?.index;
if (!varIndex) return null; if (!varIndex) return null;
if (!genesets) return null; if (!genesets) return null;
const varIndex = schema?.annotations?.var?.index;
const _geneset = genesets.get(colorByAccessor); const _geneset = genesets.get(colorByAccessor);
const _setGenes = Array.from(_geneset.genes.keys()); const _setGenes = Array.from(_geneset.genes.keys());