From 54d144bb75421a39552886878c07066663d2894f Mon Sep 17 00:00:00 2001 From: bkmartinjr Date: Tue, 12 Nov 2019 07:56:03 -0800 Subject: [PATCH] add build dependencies for igraph and louvain --- docs/posts/install.md | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/docs/posts/install.md b/docs/posts/install.md index 7aeeae86..204ba2b9 100644 --- a/docs/posts/install.md +++ b/docs/posts/install.md @@ -41,6 +41,13 @@ _Note: if the aforementioned optional `prepare` package installation fails, you pip install scanpy>=1.3.7 python-igraph louvain>=0.6 ``` +_On various Linux platforms, you may also need to install build dependencies first:_ + +``` +sudo apt-get install build-essential python-dev +pip install scanpy>=1.3.7 python-igraph louvain>=0.6 +``` + If you already have `cellxgene` installed, you can update to the most recent version by running: ```