fork/cellxgene
1
0
Fork 0
mirror of https://github.com/chanzuckerberg/cellxgene.git synced 2026-10-02 06:58:11 +08:00
Code Issues Packages Projects Releases Wiki Activity

Auto format python, make sure it passes lint checks (#1401)

Browse Source
This commit is contained in:
Matt Weiden
2020-04-16 08:07:10 -07:00
committed by GitHub
parent 7e7ed74b92
commit 58e4c2489b
12 changed files with 66 additions and 78 deletions
Download Patch File Download Diff File Expand all files Collapse all files
server/compute/diffexp_cxg.py
+8 -5
View File
@@ -83,10 +83,10 @@ def diffexp_ttest(adaptor, maskA, maskB, top_n=8, diffexp_lfc_cutoff=0.01):
try:
result = future.result()
part_meanA, part_varA, part_meanB, part_varB, cols = result
meanA[cols[0]: cols[1]] += part_meanA
varA[cols[0]: cols[1]] += part_varA
meanB[cols[0]: cols[1]] += part_meanB
varB[cols[0]: cols[1]] += part_varB
meanA[cols[0] : cols[1]] += part_meanA
varA[cols[0] : cols[1]] += part_varA
meanB[cols[0] : cols[1]] += part_meanB
varB[cols[0] : cols[1]] += part_varB
except Exception as e:
for future in futures:
future.cancel()
@@ -98,7 +98,10 @@ def diffexp_ttest(adaptor, maskA, maskB, top_n=8, diffexp_lfc_cutoff=0.01):
nA,
meanB.astype(dtype),
varB.astype(dtype),
nB, top_n, diffexp_lfc_cutoff)
nB,
top_n,
diffexp_lfc_cutoff,
)
return r