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Code Issues Packages Projects Releases Wiki Activity

initial support for corpora schema conventions (#1676)

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* initial support for corpora schema conventions

* remove debugging print

* add corpora util module

* tests

* lint

* PR review edits

* PR changes

* more PR changes

* more PR chnages

* PR fixes

* formatting

* PR updates

* lint

* PR review
This commit is contained in:
Bruce Martin
2020-07-28 17:32:27 -07:00
committed by GitHub
parent 5285556415
commit 59f989d26f
12 changed files with 450 additions and 104 deletions
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server/test/test_anndata_adaptor_data_load.py
+2 -5
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@@ -43,13 +43,10 @@ class DataLocatorAdaptorTest(unittest.TestCase):
def get_basic_config(self):
config = AppConfig()
config.update_server_config(
single_dataset__obs_names=None,
single_dataset__var_names=None,
single_dataset__obs_names=None, single_dataset__var_names=None,
)
config.update_default_dataset_config(
embeddings__names=["umap"],
presentation__max_categories=100,
diffexp__lfc_cutoff=0.01,
embeddings__names=["umap"], presentation__max_categories=100, diffexp__lfc_cutoff=0.01,
)
return config