diff --git a/docs/_site/assets/css/style.css b/docs/_site/assets/css/style.css index 6f8b6e8d..844cc1d9 100644 --- a/docs/_site/assets/css/style.css +++ b/docs/_site/assets/css/style.css @@ -223,3 +223,5 @@ a:hover, a:focus { color: #9E2364; font-weight: bold; } a small { font-size: 11px; color: #9E2364; margin-top: -0.3em; display: block; } a:hover small { color: #9E2364; } + +body { font: 14px/1.5 "Roboto", "Arial", Helvetica, Arial, sans-serif; color: #000000; font-weight: 400; } diff --git a/docs/_site/index.html b/docs/_site/index.html index 35700fb3..eebc7899 100644 --- a/docs/_site/index.html +++ b/docs/_site/index.html @@ -10,14 +10,16 @@ - - + + + + +{"description":"An interactive explorer for single-cell transcriptomics data","publisher":{"@type":"Organization","logo":{"@type":"ImageObject","url":"http://localhost:4000/cellxgene/cellxgene-logo.png"}},"@type":"WebSite","url":"http://localhost:4000/cellxgene/","name":"cellxgene","headline":"Index","@context":"http://schema.org"} - + @@ -25,62 +27,62 @@
- cellxgene + cellxgene -

+

An interactive explorer for single-cell transcriptomics data

- Quick start
+ Quick start
- Installation
+ Installation
- Gallery
+ Gallery
- Demo datasets
+ Demo datasets
- Preparing your data
+ Preparing your data
- Launching cellxgene
+ Launching cellxgene
- Hosting cellxgene
+ Hosting cellxgene
- Annotating data
+ Annotating data
- Methods
+ Methods
- Troubleshooting
+ Troubleshooting
- Roadmap
+ Roadmap
- Contributing (ideas or code)
+ Contributing (ideas or code)
- Contact & finding help
+ Contact & finding help
@@ -128,7 +130,7 @@ data for cellxgene.

- + diff --git a/docs/_site/posts/annotations.html b/docs/_site/posts/annotations.html index f4c7a1c1..dbc72113 100644 --- a/docs/_site/posts/annotations.html +++ b/docs/_site/posts/annotations.html @@ -12,14 +12,14 @@ - - + + +{"description":"Creating annotations","publisher":{"@type":"Organization","logo":{"@type":"ImageObject","url":"http://localhost:4000/cellxgene/cellxgene-logo.png"}},"@type":"WebPage","url":"http://localhost:4000/cellxgene/posts/annotations.html","headline":"annotations","@context":"http://schema.org"} - + @@ -27,62 +27,62 @@
- cellxgene + cellxgene -

+

An interactive explorer for single-cell transcriptomics data

- Quick start
+ Quick start
- Installation
+ Installation
- Gallery
+ Gallery
- Demo datasets
+ Demo datasets
- Preparing your data
+ Preparing your data
- Launching cellxgene
+ Launching cellxgene
- Hosting cellxgene
+ Hosting cellxgene
- Annotating data
+ Annotating data
- Methods
+ Methods
- Troubleshooting
+ Troubleshooting
- Roadmap
+ Roadmap
- Contributing (ideas or code)
+ Contributing (ideas or code)
- Contact & finding help
+ Contact & finding help
@@ -184,7 +184,7 @@ anndata.obs = anndata.obs.join(new_annotations)

- + diff --git a/docs/_site/posts/contact.html b/docs/_site/posts/contact.html index 0f88ed88..0999d275 100644 --- a/docs/_site/posts/contact.html +++ b/docs/_site/posts/contact.html @@ -12,14 +12,14 @@ - - + + +{"description":"Contact","publisher":{"@type":"Organization","logo":{"@type":"ImageObject","url":"http://localhost:4000/cellxgene/cellxgene-logo.png"}},"@type":"WebPage","url":"http://localhost:4000/cellxgene/posts/contact.html","headline":"Contact","@context":"http://schema.org"} - + @@ -27,62 +27,62 @@
- cellxgene + cellxgene -

+

An interactive explorer for single-cell transcriptomics data

- Quick start
+ Quick start
- Installation
+ Installation
- Gallery
+ Gallery
- Demo datasets
+ Demo datasets
- Preparing your data
+ Preparing your data
- Launching cellxgene
+ Launching cellxgene
- Hosting cellxgene
+ Hosting cellxgene
- Annotating data
+ Annotating data
- Methods
+ Methods
- Troubleshooting
+ Troubleshooting
- Roadmap
+ Roadmap
- Contributing (ideas or code)
+ Contributing (ideas or code)
- Contact & finding help
+ Contact & finding help
@@ -124,7 +124,7 @@

- + diff --git a/docs/_site/posts/contribute.html b/docs/_site/posts/contribute.html index 5127e7aa..242c3a6a 100644 --- a/docs/_site/posts/contribute.html +++ b/docs/_site/posts/contribute.html @@ -10,14 +10,16 @@ - - + + + + +{"description":"An interactive explorer for single-cell transcriptomics data","publisher":{"@type":"Organization","logo":{"@type":"ImageObject","url":"http://localhost:4000/cellxgene/cellxgene-logo.png"}},"@type":"WebPage","url":"http://localhost:4000/cellxgene/posts/contribute.html","headline":"Code of conduct","@context":"http://schema.org"} - + @@ -25,62 +27,62 @@
- cellxgene + cellxgene -

+

An interactive explorer for single-cell transcriptomics data

- Quick start
+ Quick start
- Installation
+ Installation
- Gallery
+ Gallery
- Demo datasets
+ Demo datasets
- Preparing your data
+ Preparing your data
- Launching cellxgene
+ Launching cellxgene
- Hosting cellxgene
+ Hosting cellxgene
- Annotating data
+ Annotating data
- Methods
+ Methods
- Troubleshooting
+ Troubleshooting
- Roadmap
+ Roadmap
- Contributing (ideas or code)
+ Contributing (ideas or code)
- Contact & finding help
+ Contact & finding help
@@ -168,7 +170,7 @@ If you’re new to git, we recommend GitKra

- + diff --git a/docs/_site/posts/demo-data.html b/docs/_site/posts/demo-data.html index 97fd1ff6..d87b1b97 100644 --- a/docs/_site/posts/demo-data.html +++ b/docs/_site/posts/demo-data.html @@ -12,14 +12,14 @@ - - + + +{"description":"Demo datasets","publisher":{"@type":"Organization","logo":{"@type":"ImageObject","url":"http://localhost:4000/cellxgene/cellxgene-logo.png"}},"@type":"WebPage","url":"http://localhost:4000/cellxgene/posts/demo-data.html","headline":"demo-data","@context":"http://schema.org"} - + @@ -27,62 +27,62 @@
- cellxgene + cellxgene -

+

An interactive explorer for single-cell transcriptomics data

- Quick start
+ Quick start
- Installation
+ Installation
- Gallery
+ Gallery
- Demo datasets
+ Demo datasets
- Preparing your data
+ Preparing your data
- Launching cellxgene
+ Launching cellxgene
- Hosting cellxgene
+ Hosting cellxgene
- Annotating data
+ Annotating data
- Methods
+ Methods
- Troubleshooting
+ Troubleshooting
- Roadmap
+ Roadmap
- Contributing (ideas or code)
+ Contributing (ideas or code)
- Contact & finding help
+ Contact & finding help
@@ -149,7 +149,7 @@ Rich metadata and annotations.

- + diff --git a/docs/_site/posts/gallery.html b/docs/_site/posts/gallery.html index d52347b8..37639c59 100644 --- a/docs/_site/posts/gallery.html +++ b/docs/_site/posts/gallery.html @@ -10,14 +10,16 @@ - - + + + + +{"description":"An interactive explorer for single-cell transcriptomics data","publisher":{"@type":"Organization","logo":{"@type":"ImageObject","url":"http://localhost:4000/cellxgene/cellxgene-logo.png"}},"@type":"WebPage","url":"http://localhost:4000/cellxgene/posts/gallery.html","headline":"Gallery","@context":"http://schema.org"} - + @@ -25,62 +27,62 @@
- cellxgene + cellxgene -

+

An interactive explorer for single-cell transcriptomics data

- Quick start
+ Quick start
- Installation
+ Installation
- Gallery
+ Gallery
- Demo datasets
+ Demo datasets
- Preparing your data
+ Preparing your data
- Launching cellxgene
+ Launching cellxgene
- Hosting cellxgene
+ Hosting cellxgene
- Annotating data
+ Annotating data
- Methods
+ Methods
- Troubleshooting
+ Troubleshooting
- Roadmap
+ Roadmap
- Contributing (ideas or code)
+ Contributing (ideas or code)
- Contact & finding help
+ Contact & finding help
@@ -125,7 +127,7 @@ Check out the cool data that our users are using cellxgene to explore!

- + diff --git a/docs/_site/posts/hosted.html b/docs/_site/posts/hosted.html index c423cbc6..d2276632 100644 --- a/docs/_site/posts/hosted.html +++ b/docs/_site/posts/hosted.html @@ -10,14 +10,16 @@ - - + + + + +{"description":"An interactive explorer for single-cell transcriptomics data","publisher":{"@type":"Organization","logo":{"@type":"ImageObject","url":"http://localhost:4000/cellxgene/cellxgene-logo.png"}},"@type":"WebPage","url":"http://localhost:4000/cellxgene/posts/hosted.html","headline":"Hosting cellxgene on the web","@context":"http://schema.org"} - + @@ -25,62 +27,62 @@
- cellxgene + cellxgene -

+

An interactive explorer for single-cell transcriptomics data

- Quick start
+ Quick start
- Installation
+ Installation
- Gallery
+ Gallery
- Demo datasets
+ Demo datasets
- Preparing your data
+ Preparing your data
- Launching cellxgene
+ Launching cellxgene
- Hosting cellxgene
+ Hosting cellxgene
- Annotating data
+ Annotating data
- Methods
+ Methods
- Troubleshooting
+ Troubleshooting
- Roadmap
+ Roadmap
- Contributing (ideas or code)
+ Contributing (ideas or code)
- Contact & finding help
+ Contact & finding help
@@ -209,7 +211,7 @@ Some other options include: Amazon Web Services, Google Cloud Platform, Digital

- + diff --git a/docs/_site/posts/install.html b/docs/_site/posts/install.html index 1ad297d5..c92901c1 100644 --- a/docs/_site/posts/install.html +++ b/docs/_site/posts/install.html @@ -10,14 +10,16 @@ - - + + + + +{"description":"An interactive explorer for single-cell transcriptomics data","publisher":{"@type":"Organization","logo":{"@type":"ImageObject","url":"http://localhost:4000/cellxgene/cellxgene-logo.png"}},"@type":"WebPage","url":"http://localhost:4000/cellxgene/posts/install.html","headline":"Install","@context":"http://schema.org"} - + @@ -25,62 +27,62 @@
- cellxgene + cellxgene -

+

An interactive explorer for single-cell transcriptomics data

- Quick start
+ Quick start
- Installation
+ Installation
- Gallery
+ Gallery
- Demo datasets
+ Demo datasets
- Preparing your data
+ Preparing your data
- Launching cellxgene
+ Launching cellxgene
- Hosting cellxgene
+ Hosting cellxgene
- Annotating data
+ Annotating data
- Methods
+ Methods
- Troubleshooting
+ Troubleshooting
- Roadmap
+ Roadmap
- Contributing (ideas or code)
+ Contributing (ideas or code)
- Contact & finding help
+ Contact & finding help
@@ -191,7 +193,7 @@ pip install cellxgene[prepare]

- + diff --git a/docs/_site/posts/launch.html b/docs/_site/posts/launch.html index f31b43b5..43e5a727 100644 --- a/docs/_site/posts/launch.html +++ b/docs/_site/posts/launch.html @@ -12,14 +12,14 @@ - - + + +{"description":"Demo datasets","publisher":{"@type":"Organization","logo":{"@type":"ImageObject","url":"http://localhost:4000/cellxgene/cellxgene-logo.png"}},"@type":"WebPage","url":"http://localhost:4000/cellxgene/posts/launch.html","headline":"demo-data","@context":"http://schema.org"} - + @@ -27,62 +27,62 @@
- cellxgene + cellxgene -

+

An interactive explorer for single-cell transcriptomics data

- Quick start
+ Quick start
- Installation
+ Installation
- Gallery
+ Gallery
- Demo datasets
+ Demo datasets
- Preparing your data
+ Preparing your data
- Launching cellxgene
+ Launching cellxgene
- Hosting cellxgene
+ Hosting cellxgene
- Annotating data
+ Annotating data
- Methods
+ Methods
- Troubleshooting
+ Troubleshooting
- Roadmap
+ Roadmap
- Contributing (ideas or code)
+ Contributing (ideas or code)
- Contact & finding help
+ Contact & finding help
@@ -169,7 +169,7 @@ to use (see --disable-diffexp for an opti

- + diff --git a/docs/_site/posts/methods.html b/docs/_site/posts/methods.html index f0aeb199..0cf6788e 100644 --- a/docs/_site/posts/methods.html +++ b/docs/_site/posts/methods.html @@ -10,14 +10,16 @@ - - + + + + +{"description":"An interactive explorer for single-cell transcriptomics data","publisher":{"@type":"Organization","logo":{"@type":"ImageObject","url":"http://localhost:4000/cellxgene/cellxgene-logo.png"}},"@type":"WebPage","url":"http://localhost:4000/cellxgene/posts/methods.html","headline":"Methods","@context":"http://schema.org"} - + @@ -25,62 +27,62 @@
- cellxgene + cellxgene -

+

An interactive explorer for single-cell transcriptomics data

- Quick start
+ Quick start
- Installation
+ Installation
- Gallery
+ Gallery
- Demo datasets
+ Demo datasets
- Preparing your data
+ Preparing your data
- Launching cellxgene
+ Launching cellxgene
- Hosting cellxgene
+ Hosting cellxgene
- Annotating data
+ Annotating data
- Methods
+ Methods
- Troubleshooting
+ Troubleshooting
- Roadmap
+ Roadmap
- Contributing (ideas or code)
+ Contributing (ideas or code)
- Contact & finding help
+ Contact & finding help
@@ -118,7 +120,7 @@

- + diff --git a/docs/_site/posts/prepare.html b/docs/_site/posts/prepare.html index e25d8ffd..86bf3854 100644 --- a/docs/_site/posts/prepare.html +++ b/docs/_site/posts/prepare.html @@ -12,14 +12,14 @@ - - + + +{"description":"Preparing your data","publisher":{"@type":"Organization","logo":{"@type":"ImageObject","url":"http://localhost:4000/cellxgene/cellxgene-logo.png"}},"@type":"WebPage","url":"http://localhost:4000/cellxgene/posts/prepare.html","headline":"prepare","@context":"http://schema.org"} - + @@ -27,62 +27,62 @@
- cellxgene + cellxgene -

+

An interactive explorer for single-cell transcriptomics data

- Quick start
+ Quick start
- Installation
+ Installation
- Gallery
+ Gallery
- Demo datasets
+ Demo datasets
- Preparing your data
+ Preparing your data
- Launching cellxgene
+ Launching cellxgene
- Hosting cellxgene
+ Hosting cellxgene
- Annotating data
+ Annotating data
- Methods
+ Methods
- Troubleshooting
+ Troubleshooting
- Roadmap
+ Roadmap
- Contributing (ideas or code)
+ Contributing (ideas or code)
- Contact & finding help
+ Contact & finding help
@@ -199,7 +199,7 @@ Default is anndata.var.names

- + diff --git a/docs/_site/posts/roadmap.html b/docs/_site/posts/roadmap.html index fdf3a2e5..b27a30f8 100644 --- a/docs/_site/posts/roadmap.html +++ b/docs/_site/posts/roadmap.html @@ -12,14 +12,14 @@ - - + + +{"description":"Roadmap","publisher":{"@type":"Organization","logo":{"@type":"ImageObject","url":"http://localhost:4000/cellxgene/cellxgene-logo.png"}},"@type":"WebPage","url":"http://localhost:4000/cellxgene/posts/roadmap.html","headline":"roadmap","@context":"http://schema.org"} - + @@ -27,62 +27,62 @@
- cellxgene + cellxgene -

+

An interactive explorer for single-cell transcriptomics data

- Quick start
+ Quick start
- Installation
+ Installation
- Gallery
+ Gallery
- Demo datasets
+ Demo datasets
- Preparing your data
+ Preparing your data
- Launching cellxgene
+ Launching cellxgene
- Hosting cellxgene
+ Hosting cellxgene
- Annotating data
+ Annotating data
- Methods
+ Methods
- Troubleshooting
+ Troubleshooting
- Roadmap
+ Roadmap
- Contributing (ideas or code)
+ Contributing (ideas or code)
- Contact & finding help
+ Contact & finding help
@@ -145,7 +145,7 @@ See issue #533<

- + diff --git a/docs/_site/posts/troubleshooting.html b/docs/_site/posts/troubleshooting.html index d7710c9b..2f39b4c8 100644 --- a/docs/_site/posts/troubleshooting.html +++ b/docs/_site/posts/troubleshooting.html @@ -12,14 +12,14 @@ - - + + +{"description":"Troubleshooting","publisher":{"@type":"Organization","logo":{"@type":"ImageObject","url":"http://localhost:4000/cellxgene/cellxgene-logo.png"}},"@type":"WebPage","url":"http://localhost:4000/cellxgene/posts/troubleshooting.html","headline":"Troubleshooting","@context":"http://schema.org"} - + @@ -27,62 +27,62 @@
- cellxgene + cellxgene -

+

An interactive explorer for single-cell transcriptomics data

- Quick start
+ Quick start
- Installation
+ Installation
- Gallery
+ Gallery
- Demo datasets
+ Demo datasets
- Preparing your data
+ Preparing your data
- Launching cellxgene
+ Launching cellxgene
- Hosting cellxgene
+ Hosting cellxgene
- Annotating data
+ Annotating data
- Methods
+ Methods
- Troubleshooting
+ Troubleshooting
- Roadmap
+ Roadmap
- Contributing (ideas or code)
+ Contributing (ideas or code)
- Contact & finding help
+ Contact & finding help
@@ -118,7 +118,7 @@

- +