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removed --diffexp cli param (#826)
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@@ -28,14 +28,6 @@ BIG_FILE_SIZE_THRESHOLD = 100 * 2**20 # 100MB
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show_default=True,
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help="Layout name, eg, 'umap'."
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)
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@click.option(
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"--diffexp",
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"-d",
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type=click.Choice(["ttest"]),
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default="ttest",
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show_default=True,
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help="Method for differential expression.",
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)
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@click.option("--title", "-t", help="Title to display (if omitted will use file name).", metavar="")
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@click.option(
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"--verbose",
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@@ -83,7 +75,6 @@ BIG_FILE_SIZE_THRESHOLD = 100 * 2**20 # 100MB
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def launch(
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data,
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layout,
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diffexp,
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title,
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verbose,
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debug,
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@@ -181,7 +172,6 @@ security risk by including the --scripts flag. Make sure you trust the scripts t
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args = {
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"layout": layout,
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"diffexp": diffexp,
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"max_category_items": max_category_items,
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"diffexp_lfc_cutoff": diffexp_lfc_cutoff,
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"obs_names": obs_names,
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