From 621b88bff4e7fb625980e60b7a48d438e33ac56b Mon Sep 17 00:00:00 2001 From: Sidney Bell Date: Thu, 21 Nov 2019 18:51:30 -0800 Subject: [PATCH] Simplify demo data download --- docs/posts/demo-data.md | 7 +++---- 1 file changed, 3 insertions(+), 4 deletions(-) diff --git a/docs/posts/demo-data.md b/docs/posts/demo-data.md index 07d7de62..7604f918 100644 --- a/docs/posts/demo-data.md +++ b/docs/posts/demo-data.md @@ -6,7 +6,6 @@ description: Demo datasets # Example datasets **To download and use these datasets, run:** -`curl -O [URL]` `unzip [filename.zip]` `cellxgene launch [filename.h5ad] --open` @@ -18,7 +17,7 @@ Healthy human PBMCs (10X). - File size: 19MB - [Raw data](http://cf.10xgenomics.com/samples/cell-exp/1.1.0/pbmc3k/pbmc3k_filtered_gene_bc_matrices.tar.gz) - [Processing](https://github.com/chanzuckerberg/cellxgene-vignettes/blob/master/dataset-processing/pbmc3k-processing.ipynb) -- Download: `curl -O https://cellxgene-example-data.czi.technology/pbmc3k.h5ad.zip` +- [Download](https://cellxgene-example-data.czi.technology/pbmc3k.h5ad.zip) ### Tabula muris 20 organs and tissues from healthy mice (Smart-Seq2). @@ -29,7 +28,7 @@ Rich metadata and annotations. - File size: 174MB - [Raw data](https://figshare.com/projects/Tabula_Muris_Transcriptomic_characterization_of_20_organs_and_tissues_from_Mus_musculus_at_single_cell_resolution/27733) - [Processing](https://github.com/chanzuckerberg/cellxgene-vignettes/blob/master/dataset-processing/tabula-muris-processing.ipynb) -- Download: `curl -O https://cellxgene-example-data.czi.technology/tabula-muris.h5ad.zip` +- [Download](https://cellxgene-example-data.czi.technology/tabula-muris.h5ad.zip) ### Tabula muris senis 22 organs and tissues from healthy mice at ages 3mo, 18mo, 21mo, and 24mo (Smart-Seq2). @@ -40,4 +39,4 @@ Rich metadata and annotations. - File size: 3.9GB - Raw data [geo link coming soon!] - [Processing](https://www.biorxiv.org/content/10.1101/661728v1) -- Download: `curl -O https://cellxgene-example-data.czi.technology/tabula-muris-senis.h5ad.zip` +- [Download](https://cellxgene-example-data.czi.technology/tabula-muris-senis.h5ad.zip)