run prettier(2.0.5) (#1438)

client/src/reducers/annotations.js

@@ -25,7 +25,7 @@ const Annotations = (
     isEditingLabelName: false,
     categoryBeingEdited: null,
     categoryAddingNewLabel: null,
-    labelEditable: { category: null, label: null }
+    labelEditable: { category: null, label: null },
   },
   action
 ) => {
@@ -40,7 +40,7 @@ const Annotations = (
       return {
         ...state,
         dataCollectionNameIsReadOnly,
-        dataCollectionName
+        dataCollectionName,
       };
     }
 
@@ -50,7 +50,7 @@ const Annotations = (
       }
       return {
         ...state,
-        dataCollectionName: action.data
+        dataCollectionName: action.data,
       };
     }
 
@@ -59,7 +59,7 @@ const Annotations = (
       return {
         ...state,
         isAddingNewLabel: true,
-        categoryAddingNewLabel: action.data
+        categoryAddingNewLabel: action.data,
       };
     }
 
@@ -67,7 +67,7 @@ const Annotations = (
       return {
         ...state,
         isAddingNewLabel: false,
-        categoryAddingNewLabel: null
+        categoryAddingNewLabel: null,
       };
     }
 
@@ -75,7 +75,7 @@ const Annotations = (
       return {
         ...state,
         isEditingCategoryName: true,
-        categoryBeingEdited: action.data
+        categoryBeingEdited: action.data,
       };
     }
 
@@ -83,7 +83,7 @@ const Annotations = (
       return {
         ...state,
         isEditingCategoryName: false,
-        categoryBeingEdited: null
+        categoryBeingEdited: null,
       };
     }
 
@@ -94,8 +94,8 @@ const Annotations = (
         isEditingLabelName: true,
         labelEditable: {
           category: action.metadataField,
-          label: action.categoryIndex
-        }
+          label: action.categoryIndex,
+        },
       };
     }
 
@@ -103,7 +103,7 @@ const Annotations = (
       return {
         ...state,
         isEditingLabelName: false,
-        labelEditable: { category: null, label: null }
+        labelEditable: { category: null, label: null },
       };
     }
 

client/src/reducers/autosave.js

@@ -1,55 +1,55 @@
 const Autosave = (
-	state = {
-		saveInProgress: false,
-		error: false,
-		lastSavedObsAnnotations: null,
-		initialDataLoadComplete: false
-	},
-	action,
-	nextSharedState
+  state = {
+    saveInProgress: false,
+    error: false,
+    lastSavedObsAnnotations: null,
+    initialDataLoadComplete: false,
+  },
+  action,
+  nextSharedState
 ) => {
-	switch (action.type) {
-		case "initial data load complete (universe exists)": {
-			/* don't save on init */
-			const { universe } = nextSharedState;
-			return {
-				...state,
-				error: false,
-				saveInProgress: false,
-				lastSavedObsAnnotations: universe.obsAnnotations,
-				initialDataLoadComplete: true,
-			};
-		}
+  switch (action.type) {
+    case "initial data load complete (universe exists)": {
+      /* don't save on init */
+      const { universe } = nextSharedState;
+      return {
+        ...state,
+        error: false,
+        saveInProgress: false,
+        lastSavedObsAnnotations: universe.obsAnnotations,
+        initialDataLoadComplete: true,
+      };
+    }
 
-		case "writable obs annotations - save started": {
-			return {
-				...state,
-				saveInProgress: true
-			};
-		}
+    case "writable obs annotations - save started": {
+      return {
+        ...state,
+        saveInProgress: true,
+      };
+    }
 
-		case "writable obs annotations - save error": {
-			const { message } = action;
-			return {
-				...state,
-				error: message,
-				saveInProgress: false
-			};
-		}
+    case "writable obs annotations - save error": {
+      const { message } = action;
+      return {
+        ...state,
+        error: message,
+        saveInProgress: false,
+      };
+    }
 
-		case "writable obs annotations - save complete": {
-			const lastSavedObsAnnotations = action.obsAnnotations;
-			return {
-				...state,
-				saveInProgress: false,
-				error: false,
-				lastSavedObsAnnotations
-			};
-		}
+    case "writable obs annotations - save complete": {
+      const lastSavedObsAnnotations = action.obsAnnotations;
+      return {
+        ...state,
+        saveInProgress: false,
+        error: false,
+        lastSavedObsAnnotations,
+      };
+    }
 
-		default:
-			return { ...state };
-	}
+    default:
+      return { ...state };
+  }
 };
 
 export default Autosave;

client/src/reducers/categoricalSelection.js

@@ -36,7 +36,7 @@ const CategoricalSelection = (
       if (names.length === 0) return state;
       return {
         ...state,
-        ...CH.createCategoricalSelection(world, names)
+        ...CH.createCategoricalSelection(world, names),
       };
     }
 
@@ -52,8 +52,8 @@ const CategoricalSelection = (
         ...state,
         [action.metadataField]: {
           ...state[action.metadataField],
-          categoryValueSelected: newCategoryValueSelected
-        }
+          categoryValueSelected: newCategoryValueSelected,
+        },
       };
       return newCategoricalSelection;
     }
@@ -70,8 +70,8 @@ const CategoricalSelection = (
         ...state,
         [action.metadataField]: {
           ...state[action.metadataField],
-          categoryValueSelected: newCategoryValueSelected
-        }
+          categoryValueSelected: newCategoryValueSelected,
+        },
       };
       return newCategoricalSelection;
     }
@@ -87,8 +87,8 @@ const CategoricalSelection = (
           categorySelected: false,
           categoryValueSelected: Array.from(
             state[action.metadataField].categoryValueSelected
-          ).fill(false)
-        }
+          ).fill(false),
+        },
       };
       return newCategoricalSelection;
     }
@@ -104,8 +104,8 @@ const CategoricalSelection = (
           categorySelected: true,
           categoryValueSelected: Array.from(
             state[action.metadataField].categoryValueSelected
-          ).fill(true)
-        }
+          ).fill(true),
+        },
       };
       return newCategoricalSelection;
     }
@@ -115,7 +115,7 @@ const CategoricalSelection = (
       const name = action.data;
       return {
         ...state,
-        ...CH.createCategoricalSelection(world, [name])
+        ...CH.createCategoricalSelection(world, [name]),
       };
     }
 
@@ -143,7 +143,7 @@ const CategoricalSelection = (
       const { [name]: _, ...partialState } = state;
       return {
         ...partialState,
-        ...CH.createCategoricalSelection(world, [name])
+        ...CH.createCategoricalSelection(world, [name]),
       };
     }
 

client/src/reducers/centroidLabels.js

@@ -2,7 +2,7 @@ import calcCentroid from "../util/centroid";
 
 const initialState = {
   labels: [],
-  showLabels: false
+  showLabels: false,
 };
 
 const centroidLabels = (state = initialState, action, sharedNextState) => {
@@ -10,7 +10,7 @@ const centroidLabels = (state = initialState, action, sharedNextState) => {
     world,
     layoutChoice,
     categoricalSelection,
-    colors: { colorAccessor }
+    colors: { colorAccessor },
   } = sharedNextState;
 
   const showLabels = action.showLabels ?? state.showLabels;
@@ -34,7 +34,7 @@ const centroidLabels = (state = initialState, action, sharedNextState) => {
                 categoricalSelection,
                 world.schema.annotations.obsByName
               )
-            : []
+            : [],
       };
 
     case "color by categorical metadata":
@@ -45,7 +45,7 @@ const centroidLabels = (state = initialState, action, sharedNextState) => {
         return {
           ...state,
           labels: [],
-          showLabels
+          showLabels,
         };
       }
 
@@ -59,7 +59,7 @@ const centroidLabels = (state = initialState, action, sharedNextState) => {
           categoricalSelection,
           world.schema.annotations.obsByName
         ),
-        showLabels
+        showLabels,
       };
 
     case "color by continuous metadata":

client/src/reducers/colors.js

@@ -5,7 +5,7 @@ const ColorsReducer = (
     colorMode: null,
     colorAccessor: null,
     rgb: null,
-    scale: null
+    scale: null,
   },
   action,
   nextSharedState,
@@ -23,7 +23,7 @@ const ColorsReducer = (
         colorAccessor,
         colorMode,
         rgb,
-        scale
+        scale,
       };
     }
 
@@ -31,7 +31,7 @@ const ColorsReducer = (
       const { userColors } = action;
       return {
         ...state,
-        userColors
+        userColors,
       };
     }
 
@@ -47,7 +47,7 @@ const ColorsReducer = (
       return {
         ...state,
         rgb,
-        scale
+        scale,
       };
     }
 
@@ -73,7 +73,7 @@ const ColorsReducer = (
       return {
         ...state,
         rgb,
-        scale
+        scale,
       };
     }
 
@@ -85,14 +85,14 @@ const ColorsReducer = (
       /* else reset */
       return {
         ...state,
-        ...ColorHelpers.resetColors(prevSharedState.world)
+        ...ColorHelpers.resetColors(prevSharedState.world),
       };
     }
 
     case "reset colorscale": {
       return {
         ...state,
-        ...ColorHelpers.resetColors(prevSharedState.world)
+        ...ColorHelpers.resetColors(prevSharedState.world),
       };
     }
 
@@ -107,13 +107,18 @@ const ColorsReducer = (
       const colorMode = !resetCurrent ? action.type : null;
       const colorAccessor = !resetCurrent ? action.colorAccessor : null;
 
-      const { rgb, scale } = ColorHelpers.createColors(world, colorMode, colorAccessor, colors.userColors);
+      const { rgb, scale } = ColorHelpers.createColors(
+        world,
+        colorMode,
+        colorAccessor,
+        colors.userColors
+      );
       return {
         ...state,
         colorMode,
         colorAccessor,
         rgb,
-        scale
+        scale,
       };
     }
 
@@ -136,7 +141,7 @@ const ColorsReducer = (
         colorMode,
         colorAccessor,
         rgb,
-        scale
+        scale,
       };
     }
 
@@ -153,7 +158,11 @@ const ColorsReducer = (
         return state;
 
       /* else, we need to rebuild colors as labels have changed! */
-      const { rgb, scale } = ColorHelpers.createColors(world, colorMode, colorAccessor);
+      const { rgb, scale } = ColorHelpers.createColors(
+        world,
+        colorMode,
+        colorAccessor
+      );
       return { ...state, rgb, scale };
     }
 

client/src/reducers/config.js

@@ -3,7 +3,7 @@ const Config = (
   state = {
     displayNames: null,
     features: null,
-    parameters: null
+    parameters: null,
   },
   action
 ) => {
@@ -12,19 +12,19 @@ const Config = (
       return {
         ...state,
         loading: true,
-        error: null
+        error: null,
       };
     case "configuration load complete":
       return {
         ...state,
         loading: false,
         error: null,
-        ...action.config
+        ...action.config,
       };
     case "initial data load error":
       return {
         ...state,
-        error: action.error
+        error: action.error,
       };
     default:
       return state;

client/src/reducers/differential.js

@@ -6,7 +6,7 @@ const Differential = (
     loading: null,
     error: null,
     celllist1: null,
-    celllist2: null
+    celllist2: null,
   },
   action
 ) => {
@@ -15,37 +15,37 @@ const Differential = (
       return {
         ...state,
         loading: true,
-        error: null
+        error: null,
       };
     case "request differential expression success":
       return {
         ...state,
         error: null,
         loading: false,
-        diffExp: action.data
+        diffExp: action.data,
       };
     case "request differential expression error":
       return {
         ...state,
         loading: false,
-        error: action.data
+        error: action.data,
       };
     case "store current cell selection as differential set 1":
       return {
         ...state,
-        celllist1: action.data
+        celllist1: action.data,
       };
     case "store current cell selection as differential set 2":
       return {
         ...state,
-        celllist2: action.data
+        celllist2: action.data,
       };
     case "clear differential expression":
       return {
         ...state,
         diffExp: null,
         celllist1: null,
-        celllist2: null
+        celllist2: null,
       };
     case "reset World to eq Universe":
     case "set World to current selection":
@@ -53,7 +53,7 @@ const Differential = (
         ...state,
         diffExp: null,
         celllist1: null,
-        celllist2: null
+        celllist2: null,
       };
     default:
       return state;

client/src/reducers/graphSelection.js

@@ -1,7 +1,7 @@
 const GraphSelection = (
   state = {
     tool: "lasso", // what selection tool mode (lasso, brush, ...)
-    selection: { mode: "all" } // current selection, which is tool specific
+    selection: { mode: "all" }, // current selection, which is tool specific
   },
   action
 ) => {
@@ -12,8 +12,8 @@ const GraphSelection = (
       return {
         ...state,
         selection: {
-          mode: "all"
-        }
+          mode: "all",
+        },
       };
     }
 
@@ -24,8 +24,8 @@ const GraphSelection = (
         ...state,
         selection: {
           mode: "within-rect",
-          brushCoords
-        }
+          brushCoords,
+        },
       };
     }
 
@@ -35,8 +35,8 @@ const GraphSelection = (
         ...state,
         selection: {
           mode: "within-polygon",
-          polygon
-        }
+          polygon,
+        },
       };
     }
 
@@ -47,8 +47,8 @@ const GraphSelection = (
       return {
         ...state,
         selection: {
-          mode: "all"
-        }
+          mode: "all",
+        },
       };
     }
 

client/src/reducers/layoutChoice.js

@@ -9,14 +9,14 @@ about commonly used names.  Preferentially, pick in the following order:
 */
 function bestDefaultLayout(layouts) {
   const preferredNames = ["umap", "tsne", "pca"];
-  const idx = preferredNames.findIndex(name => layouts.indexOf(name) !== -1);
+  const idx = preferredNames.findIndex((name) => layouts.indexOf(name) !== -1);
   if (idx !== -1) return preferredNames[idx];
   return layouts[0];
 }
 
 function setToDefaultLayout(world) {
   const { schema } = world;
-  const available = schema.layout.obs.map(v => v.name).sort();
+  const available = schema.layout.obs.map((v) => v.name).sort();
   const current = bestDefaultLayout(available);
   const currentDimNames = schema.layout.obsByName[current].dims;
   return { available, current, currentDimNames };
@@ -26,7 +26,7 @@ const LayoutChoice = (
   state = {
     available: [], // all available choices
     current: undefined, // name of the current layout, eg, 'umap'
-    currentDimNames: [] // dimension name
+    currentDimNames: [], // dimension name
   },
   action,
   nextSharedState
@@ -37,7 +37,7 @@ const LayoutChoice = (
       const { universe } = nextSharedState;
       return {
         ...state,
-        ...setToDefaultLayout(universe)
+        ...setToDefaultLayout(universe),
       };
     }
 
@@ -53,7 +53,7 @@ const LayoutChoice = (
       const available = Array.from(new Set(state.available).add(name));
       return {
         ...state,
-        available
+        available,
       };
     }
 
@@ -64,12 +64,12 @@ const LayoutChoice = (
       if (dflt.available.includes(current)) {
         return {
           ...state,
-          available: dflt.available
+          available: dflt.available,
         };
       }
       return {
         ...state,
-        ...dflt
+        ...dflt,
       };
     }
 

client/src/reducers/ontology.js

@@ -3,7 +3,7 @@ const Ontology = (
     enabled: false, // are ontology terms enabled?
     terms: null, // an array of term names, eg, ['cell', 'lung cell', ...]
     termSet: null, // a Set object containing all terms, for fast lookup
-    loading: true
+    loading: true,
   },
   action
 ) => {
@@ -20,7 +20,7 @@ const Ontology = (
         loading: false,
         enabled,
         terms,
-        termSet
+        termSet,
       };
     }
     default: {

client/src/reducers/pointDilation.js

@@ -1,6 +1,6 @@
 const initialState = {
   metadataField: "",
-  categoryField: ""
+  categoryField: "",
 };
 
 const pointDialation = (state = initialState, action, sharedNextState) => {
@@ -15,7 +15,7 @@ const pointDialation = (state = initialState, action, sharedNextState) => {
       return {
         ...state,
         metadataField,
-        categoryField
+        categoryField,
       };
 
     case "category value mouse hover end":

client/src/reducers/reembed.js

@@ -3,7 +3,7 @@ controller state is not part of the undo/redo history
 */
 export const reembedController = (
   state = {
-    pendingFetch: null
+    pendingFetch: null,
   },
   action
 ) => {
@@ -11,7 +11,7 @@ export const reembedController = (
     case "reembed: request start": {
       return {
         ...state,
-        pendingFetch: action.abortableFetch
+        pendingFetch: action.abortableFetch,
       };
     }
     case "reembed: request aborted":
@@ -19,7 +19,7 @@ export const reembedController = (
     case "reembed: request completed": {
       return {
         ...state,
-        pendingFetch: null
+        pendingFetch: null,
       };
     }
     default: {
@@ -33,7 +33,7 @@ actual reembedding data is part of the undo/redo history
 */
 export const reembedding = (
   state = {
-    reembeddings: new Map()
+    reembeddings: new Map(),
   },
   action
 ) => {
@@ -47,14 +47,14 @@ export const reembedding = (
         reembeddings: new Map(reembeddings).set(name, {
           name,
           schema,
-          embedding
-        })
+          embedding,
+        }),
       };
     }
     case "reembed: clear all reembeddings": {
       return {
         ...state,
-        reembeddings: new Map()
+        reembeddings: new Map(),
       };
     }
     default: {

client/src/reducers/resetCache.js

@@ -8,7 +8,7 @@ which improves Reset UI performance.
 */
 const ResetCacheReducer = (
   state = {
-    crossfilter: null
+    crossfilter: null,
   },
   action,
   nextSharedState
@@ -19,7 +19,7 @@ const ResetCacheReducer = (
       const { crossfilter } = nextSharedState;
       return {
         ...state,
-        crossfilter
+        crossfilter,
       };
     }
     default: {

client/src/reducers/responsive.js

@@ -2,7 +2,7 @@
 const Responsive = (
   state = {
     width: null,
-    height: null
+    height: null,
   },
   action
 ) => {
@@ -11,7 +11,7 @@ const Responsive = (
       return {
         ...state,
         width: action.data.width,
-        height: action.data.height
+        height: action.data.height,
       };
     default:
       return state;

client/src/reducers/undoable.js

@@ -80,7 +80,7 @@ const Undoable = (reducer, undoableKeys, options = {}) => {
     const past = currentState[pastKey];
     const future = currentState[futureKey];
     if (past.length === 0) return currentState;
-    const currentUndoableState = Object.entries(currentState).filter(kv =>
+    const currentUndoableState = Object.entries(currentState).filter((kv) =>
       undoableKeysSet.has(kv[0])
     );
     const newPast = [...past];
@@ -91,7 +91,7 @@ const Undoable = (reducer, undoableKeys, options = {}) => {
       ...fromEntries(newState),
       [pastKey]: newPast,
       [futureKey]: newFuture,
-      [pendingKey]: null
+      [pendingKey]: null,
     };
     return nextState;
   }
@@ -103,7 +103,7 @@ const Undoable = (reducer, undoableKeys, options = {}) => {
     const past = currentState[pastKey] || [];
     const future = currentState[futureKey] || [];
     if (future.length === 0) return currentState;
-    const currentUndoableState = Object.entries(currentState).filter(kv =>
+    const currentUndoableState = Object.entries(currentState).filter((kv) =>
       undoableKeysSet.has(kv[0])
     );
     const newFuture = [...future];
@@ -114,7 +114,7 @@ const Undoable = (reducer, undoableKeys, options = {}) => {
       ...fromEntries(newState),
       [pastKey]: newPast,
       [futureKey]: newFuture,
-      [pendingKey]: null
+      [pendingKey]: null,
     };
     return nextState;
   }
@@ -128,7 +128,7 @@ const Undoable = (reducer, undoableKeys, options = {}) => {
       [pastKey]: [],
       [futureKey]: [],
       [filterStateKey]: {},
-      [pendingKey]: null
+      [pendingKey]: null,
     };
   }
 
@@ -145,7 +145,7 @@ const Undoable = (reducer, undoableKeys, options = {}) => {
       [pastKey]: past,
       [futureKey]: future,
       [filterStateKey]: filterState,
-      [pendingKey]: pending
+      [pendingKey]: pending,
     };
   }
 
@@ -154,7 +154,7 @@ const Undoable = (reducer, undoableKeys, options = {}) => {
   */
   function save(currentState, action, filterState) {
     const past = currentState[pastKey] || [];
-    const currentUndoableState = Object.entries(currentState).filter(kv =>
+    const currentUndoableState = Object.entries(currentState).filter((kv) =>
       undoableKeysSet.has(kv[0])
     );
     const res = reducer(currentState, action);
@@ -164,7 +164,7 @@ const Undoable = (reducer, undoableKeys, options = {}) => {
       [pastKey]: newPast,
       [futureKey]: [],
       [filterStateKey]: filterState,
-      [pendingKey]: null
+      [pendingKey]: null,
     };
     return nextState;
   }
@@ -173,12 +173,12 @@ const Undoable = (reducer, undoableKeys, options = {}) => {
   Save current state as pending history change.  No other side effects.
   */
   function stashPending(currentState) {
-    const currentUndoableState = Object.entries(currentState).filter(kv =>
+    const currentUndoableState = Object.entries(currentState).filter((kv) =>
       undoableKeysSet.has(kv[0])
     );
     return {
       ...currentState,
-      [pendingKey]: currentUndoableState
+      [pendingKey]: currentUndoableState,
     };
   }
 
@@ -188,7 +188,7 @@ const Undoable = (reducer, undoableKeys, options = {}) => {
   function cancelPending(currentState) {
     return {
       ...currentState,
-      [pendingKey]: null
+      [pendingKey]: null,
     };
   }
 
@@ -203,7 +203,7 @@ const Undoable = (reducer, undoableKeys, options = {}) => {
       ...currentState,
       [pastKey]: newPast,
       [futureKey]: [],
-      [pendingKey]: null
+      [pendingKey]: null,
     };
     return nextState;
   }
@@ -213,7 +213,7 @@ const Undoable = (reducer, undoableKeys, options = {}) => {
       [pastKey]: [],
       [futureKey]: [],
       [filterStateKey]: {},
-      [pendingKey]: null
+      [pendingKey]: null,
     },
     action
   ) => {
@@ -241,7 +241,7 @@ const Undoable = (reducer, undoableKeys, options = {}) => {
         );
         const {
           [filterActionKey]: filterAction,
-          [filterStateKey]: filterStateUpdate
+          [filterStateKey]: filterStateUpdate,
         } = actionFilterResp;
         const nextFilterState = { ...currentFilterState, ...filterStateUpdate };
 

client/src/reducers/undoableConfig.js

@@ -49,7 +49,7 @@ const skipOnActions = new Set([
   "annotation: disable category edit mode",
   "annotation: activate edit label mode",
   "annotation: cancel edit label mode",
-  "set annotations collection name"
+  "set annotations collection name",
 ]);
 
 /*
@@ -101,7 +101,7 @@ const saveOnActions = new Set([
   "annotation: label edited",
   "annotation: label current cell selection",
   "annotation: delete label",
-  "annotation: category edited"
+  "annotation: category edited",
 ]);
 
 /**
@@ -115,26 +115,26 @@ See graph definition for the transitions that use each.
 
 Signature:  (fsm, transition, reducerState, reducerAction) => undoableAction
 */
-const stashPending = fsm => ({
+const stashPending = (fsm) => ({
   [actionKey]: "stashPending",
-  [stateKey]: { fsm }
+  [stateKey]: { fsm },
 });
 const cancelPending = () => ({
   [actionKey]: "cancelPending",
-  [stateKey]: { fsm: null }
+  [stateKey]: { fsm: null },
 });
 const applyPending = () => ({
   [actionKey]: "applyPending",
-  [stateKey]: { fsm: null }
+  [stateKey]: { fsm: null },
 });
 const skip = (fsm, transition) => ({
   [actionKey]: "skip",
-  [stateKey]: { fsm: transition.to !== "done" ? fsm : null }
+  [stateKey]: { fsm: transition.to !== "done" ? fsm : null },
 });
 const clear = () => ({ [actionKey]: "clear", [stateKey]: { fsm: null } });
 const save = (fsm, transition) => ({
   [actionKey]: "save",
-  [stateKey]: { fsm: transition.to !== "done" ? fsm : null }
+  [stateKey]: { fsm: transition.to !== "done" ? fsm : null },
 });
 
 /*
@@ -171,11 +171,11 @@ Basic approach:
   * only implement complex state machines where absolutely required (eg,
     multi-event seleciton and the like)
 */
-const actionFilter = debug => (state, action, prevFilterState) => {
+const actionFilter = (debug) => (state, action, prevFilterState) => {
   const actionType = action.type;
   const filterState = {
     ...prevFilterState,
-    prevAction: action
+    prevAction: action,
   };
   if (skipOnActions.has(actionType)) {
     return { [actionKey]: "skip", [stateKey]: filterState };
@@ -246,7 +246,7 @@ const debug = false;
 const undoableConfig = {
   debug,
   historyLimit: 50, // maximum history size
-  actionFilter: actionFilter(debug)
+  actionFilter: actionFilter(debug),
 };
 
 /*
@@ -258,9 +258,9 @@ if (debug) {
   Confirm no intersection between the various trivial rejection action filters
   */
   if (
-    new Set([...skipOnActions].filter(x => clearOnActions.has(x))).size > 0 ||
-    new Set([...skipOnActions].filter(x => saveOnActions.has(x))).size > 0 ||
-    new Set([...clearOnActions].filter(x => saveOnActions.has(x))).size > 0
+    new Set([...skipOnActions].filter((x) => clearOnActions.has(x))).size > 0 ||
+    new Set([...skipOnActions].filter((x) => saveOnActions.has(x))).size > 0 ||
+    new Set([...clearOnActions].filter((x) => saveOnActions.has(x))).size > 0
   ) {
     console.error(
       "Undoable misconfiguration - action filters have redundant events"
@@ -275,10 +275,10 @@ if (debug) {
   const trivialFilters = new Set([
     ...skipOnActions,
     ...clearOnActions,
-    ...saveOnActions
+    ...saveOnActions,
   ]);
   const trivialOverlapWithFsm = new Set(
-    [...trivialFilters].filter(x => seedFsm.events.has(x))
+    [...trivialFilters].filter((x) => seedFsm.events.has(x))
   );
   if (trivialOverlapWithFsm.size > 0) {
     console.error(

client/src/reducers/undoableFsm.js

@@ -32,13 +32,13 @@ const createFsmTransitions = (
       event: "graph brush start",
       from: "init",
       to: "graph brush in progress",
-      action: stashPending
+      action: stashPending,
     },
     {
       event: "graph brush cancel",
       from: "graph brush in progress",
       to: "done",
-      action: applyPending
+      action: applyPending,
     },
     {
       event: "graph brush deselect",
@@ -48,13 +48,13 @@ const createFsmTransitions = (
       action: (fsm, transition, data) =>
         data.state.graphSelection.selection.mode === "all"
           ? cancelPending()
-          : applyPending()
+          : applyPending(),
     },
     {
       event: "graph brush end",
       from: "graph brush in progress",
       to: "done",
-      action: applyPending
+      action: applyPending,
     },
 
     /* graph selection lasso */
@@ -62,13 +62,13 @@ const createFsmTransitions = (
       event: "graph lasso start",
       from: "init",
       to: "graph lasso in progress",
-      action: stashPending
+      action: stashPending,
     },
     {
       event: "graph lasso cancel",
       from: "graph lasso in progress",
       to: "done",
-      action: applyPending
+      action: applyPending,
     },
     {
       event: "graph lasso deselect",
@@ -78,13 +78,13 @@ const createFsmTransitions = (
       action: (fsm, transition, data) =>
         data.state.graphSelection.selection.mode === "all"
           ? cancelPending()
-          : applyPending()
+          : applyPending(),
     },
     {
       event: "graph lasso end",
       from: "graph lasso in progress",
       to: "done",
-      action: applyPending
+      action: applyPending,
     },
 
     /* Continuous metadata histogram brush selection */
@@ -92,19 +92,19 @@ const createFsmTransitions = (
       event: "continuous metadata histogram start",
       from: "init",
       to: "continuous histo select in progress",
-      action: stashPending
+      action: stashPending,
     },
     {
       event: "continuous metadata histogram cancel",
       from: "continuous histo select in progress",
       to: "done",
-      action: cancelPending
+      action: cancelPending,
     },
     {
       event: "continuous metadata histogram end",
       from: "continuous histo select in progress",
       to: "done",
-      action: applyPending
+      action: applyPending,
     },
 
     /* Single gene request by user */
@@ -112,25 +112,25 @@ const createFsmTransitions = (
       event: "single user defined gene start",
       from: "init",
       to: "single user gene request in progress",
-      action: stashPending
+      action: stashPending,
     },
     {
       event: "request user defined gene error",
       from: "single user gene request in progress",
       to: "single user gene error in progress",
-      action: skip
+      action: skip,
     },
     {
       event: "single user defined gene error",
       from: "single user gene error in progress",
       to: "done",
-      action: cancelPending
+      action: cancelPending,
     },
     {
       event: "single user defined gene complete",
       from: "single user gene request in progress",
       to: "done",
-      action: applyPending
+      action: applyPending,
     },
 
     /* Bulk gene request by user */
@@ -138,25 +138,25 @@ const createFsmTransitions = (
       event: "bulk user defined gene start",
       from: "init",
       to: "bulk user gene request in progress",
-      action: stashPending
+      action: stashPending,
     },
     {
       event: "request user defined gene error",
       from: "bulk user gene request in progress",
       to: "bulk user gene request error in progress",
-      action: skip
+      action: skip,
     },
     {
       event: "bulk user defined gene error",
       from: "bulk user gene request error in progress",
       to: "done",
-      action: cancelPending
+      action: cancelPending,
     },
     {
       event: "bulk user defined gene complete",
       from: "bulk user gene request in progress",
       to: "done",
-      action: applyPending
+      action: applyPending,
     },
 
     /* Compute Differential Expression button user action */
@@ -164,19 +164,19 @@ const createFsmTransitions = (
       event: "request differential expression started",
       from: "init",
       to: "diffexp in progress",
-      action: stashPending
+      action: stashPending,
     },
     {
       event: "request user defined gene error",
       from: "diffexp in progress",
       to: "done",
-      action: cancelPending
+      action: cancelPending,
     },
     {
       event: "request differential expression success",
       from: "diffexp in progress",
       to: "done",
-      action: applyPending
+      action: applyPending,
     },
 
     /* Clear Differential Expression button user action */
@@ -184,13 +184,13 @@ const createFsmTransitions = (
       event: "clear differential expression",
       from: "init",
       to: "CDE Button in progress",
-      action: stashPending
+      action: stashPending,
     },
     {
       event: "clear scatterplot",
       from: "CDE Button in progress",
       to: "done",
-      action: applyPending
+      action: applyPending,
     },
 
     /* clear scatter plot button (eg, on scatterplot view) */
@@ -198,8 +198,8 @@ const createFsmTransitions = (
       event: "clear scatterplot",
       from: "init",
       to: "done",
-      action: save
-    }
+      action: save,
+    },
   ];
 };
 

client/src/reducers/universe.js

@@ -2,12 +2,12 @@ import { unassignedCategoryLabel } from "../globals";
 import {
   addObsAnnotations,
   addVarAnnotations,
-  addObsLayout
+  addObsLayout,
 } from "../util/stateManager/universe";
 import {
   World,
   ControlsHelpers,
-  AnnotationsHelpers
+  AnnotationsHelpers,
 } from "../util/stateManager";
 
 const Universe = (state = null, action, nextSharedState, prevSharedState) => {
@@ -23,19 +23,19 @@ const Universe = (state = null, action, nextSharedState, prevSharedState) => {
         case "obsAnnotations": {
           return {
             ...state,
-            ...addObsAnnotations(state, dataframe)
+            ...addObsAnnotations(state, dataframe),
           };
         }
         case "varAnnotations": {
           return {
             ...state,
-            ...addVarAnnotations(state, dataframe)
+            ...addVarAnnotations(state, dataframe),
           };
         }
         case "obsLayout": {
           return {
             ...state,
-            ...addObsLayout(state, dataframe)
+            ...addObsLayout(state, dataframe),
           };
         }
         default: {
@@ -62,8 +62,10 @@ const Universe = (state = null, action, nextSharedState, prevSharedState) => {
       const { userDefinedGenes, diffexpGenes } = prevSharedState;
       const allTheGenesWeNeed = [
         ...new Set(
-          [userDefinedGenes, diffexpGenes, Object.keys(action.expressionData)].filter(ele => ele).flat()
-        )
+          [userDefinedGenes, diffexpGenes, Object.keys(action.expressionData)]
+            .filter((ele) => ele)
+            .flat()
+        ),
       ];
       varData = ControlsHelpers.pruneVarDataCache(varData, allTheGenesWeNeed);
       return { ...state, varData };
@@ -98,7 +100,7 @@ const Universe = (state = null, action, nextSharedState, prevSharedState) => {
           categoryToDuplicate,
           name,
           {
-            writable: true
+            writable: true,
           }
         );
         /* if we are duplicating a non-writable annotation, it may not have an unassigned category */
@@ -114,7 +116,7 @@ const Universe = (state = null, action, nextSharedState, prevSharedState) => {
           name,
           categories,
           type: "categorical",
-          writable: true
+          writable: true,
         });
         data = new Array(state.nObs).fill(unassignedCategoryLabel);
       }
@@ -134,7 +136,7 @@ const Universe = (state = null, action, nextSharedState, prevSharedState) => {
 
       const colSchema = {
         ...state.schema.annotations.obsByName[name],
-        name: newName
+        name: newName,
       };
       const schema = AnnotationsHelpers.addObsAnnoSchema(
         AnnotationsHelpers.removeObsAnnoSchema(state.schema, name),

client/src/reducers/world.js

@@ -2,11 +2,11 @@ import { unassignedCategoryLabel } from "../globals";
 import {
   World,
   ControlsHelpers,
-  AnnotationsHelpers
+  AnnotationsHelpers,
 } from "../util/stateManager";
 import {
   addObsLayout,
-  removeObsLayout
+  removeObsLayout,
 } from "../util/stateManager/schemaHelpers";
 import clip from "../util/clip";
 import quantile from "../util/quantile";
@@ -45,14 +45,14 @@ const WorldReducer = (
       if (dim == "varData" || dim == "obsAnnotations") {
         unclipped = {
           ...unclipped,
-          [dim]: universe[dim].clone()
+          [dim]: universe[dim].clone(),
         };
       }
       return {
         ...state,
         schema: universe.schema,
         [dim]: universe[dim].clone(),
-        unclipped
+        unclipped,
       };
     }
 
@@ -113,9 +113,9 @@ const WorldReducer = (
       const allTheGenesWeNeed = [
         ...new Set(
           [userDefinedGenes, diffexpGenes, Object.keys(action.expressionData)]
-            .filter(ele => ele)
+            .filter((ele) => ele)
             .flat()
-        )
+        ),
       ];
       unclippedVarData = ControlsHelpers.pruneVarDataCache(
         unclippedVarData,
@@ -130,14 +130,14 @@ const WorldReducer = (
       let clippedVarData = state.varData;
       const keysToDrop = clippedVarData.colIndex
         .keys()
-        .filter(k => !unclippedVarData.hasCol(k));
+        .filter((k) => !unclippedVarData.hasCol(k));
       const keysToAdd = unclippedVarData.colIndex
         .keys()
-        .filter(k => !clippedVarData.hasCol(k));
-      keysToDrop.forEach(k => {
+        .filter((k) => !clippedVarData.hasCol(k));
+      keysToDrop.forEach((k) => {
         clippedVarData = clippedVarData.dropCol(k);
       });
-      keysToAdd.forEach(k => {
+      keysToAdd.forEach((k) => {
         const data = unclippedVarData.col(k).asArray();
         const q = [state.clipQuantiles.min, state.clipQuantiles.max];
         const [qMinVal, qMaxVal] = quantile(q, data);
@@ -154,8 +154,8 @@ const WorldReducer = (
         varData: clippedVarData,
         unclipped: {
           ...state.unclipped,
-          varData: unclippedVarData
-        }
+          varData: unclippedVarData,
+        },
       };
     }
 
@@ -188,7 +188,7 @@ const WorldReducer = (
           name,
           newAnnotation,
           state.unclipped.obsAnnotations.rowIndex
-        )
+        ),
       };
       return { ...state, schema, obsAnnotations, unclipped };
     }
@@ -201,7 +201,7 @@ const WorldReducer = (
       const obsAnnotations = state.obsAnnotations.renameCol(name, newName);
       const unclipped = {
         ...state.unclipped,
-        obsAnnotations: state.unclipped.obsAnnotations.renameCol(name, newName)
+        obsAnnotations: state.unclipped.obsAnnotations.renameCol(name, newName),
       };
       return { ...state, schema, obsAnnotations, unclipped };
     }
@@ -213,7 +213,7 @@ const WorldReducer = (
       const obsAnnotations = state.obsAnnotations.dropCol(name);
       const unclipped = {
         ...state.unclipped,
-        obsAnnotations: state.unclipped.obsAnnotations.dropCol(name)
+        obsAnnotations: state.unclipped.obsAnnotations.dropCol(name),
       };
       return { ...state, schema, obsAnnotations, unclipped };
     }
@@ -233,7 +233,7 @@ const WorldReducer = (
             crossfilter,
             metadataField,
             newLabelText
-          )
+          ),
         };
       }
       return { ...state, schema };
@@ -253,7 +253,7 @@ const WorldReducer = (
           metadataField,
           oldLabelName,
           newLabelName
-        )
+        ),
       };
       const obsAnnotations = state.obsAnnotations.replaceColData(
         metadataField,
@@ -274,7 +274,7 @@ const WorldReducer = (
           metadataField,
           label,
           unassignedCategoryLabel
-        )
+        ),
       };
       const obsAnnotations = state.obsAnnotations.replaceColData(
         metadataField,
@@ -288,7 +288,7 @@ const WorldReducer = (
       const { crossfilter } = prevSharedState;
       return {
         ...state,
-        ...setLabelOnCurrentSelection(state, crossfilter, metadataField, label)
+        ...setLabelOnCurrentSelection(state, crossfilter, metadataField, label),
       };
     }
 
@@ -306,14 +306,14 @@ const WorldReducer = (
       const embedingLabels = embedding.colIndex.keys();
       const labels = {
         [embedingLabels[0]]: dims[0],
-        [embedingLabels[1]]: dims[1]
+        [embedingLabels[1]]: dims[1],
       };
       obsLayout = obsLayout.withColsFrom(embedding, labels);
       schema = addObsLayout(schema, embeddingSchema);
       return {
         ...state,
         obsLayout,
-        schema
+        schema,
       };
     }
 
@@ -334,7 +334,7 @@ const WorldReducer = (
       return {
         ...state,
         obsLayout,
-        schema
+        schema,
       };
     }
 
@@ -357,7 +357,7 @@ function setLabelOnCurrentSelection(world, crossfilter, metadataField, label) {
       metadataField,
       mask,
       label
-    )
+    ),
   };
   const obsAnnotations = world.obsAnnotations.replaceColData(
     metadataField,