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Add support for anndata backed mode (#943)
* initial cut at backed mode * make flask multithreading conditional on debug flag * update X access to support backed mode * lint * improve help message for backed mode * fix tests * add MatrixProxy to normalize supported matrix types * add FAQ entry for --backed * remove use of matrix.T * clean up * add ability to disable diffexp from CLI; add hueristic to detect likely slow diffexp calculation, and warn user * fix tests * do not print diffexp speed warning if diffexp is disabled * tweak wording of diffexp speed messages * add FAQ entry on --disable-diffexp * revise heuristic for warning about slow diffexp * use quick tooltip delay on diffexp button
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@@ -29,7 +29,9 @@ class CXGDriver(metaclass=ABCMeta):
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return {
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"layout": None,
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"max_category_items": None,
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"diffexp_lfc_cutoff": None
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"diffexp_lfc_cutoff": None,
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"disable_diffexp": False,
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"diffexp_may_be_slow": False
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}
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@property
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