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re-implement re-embeddings (#1679)

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* fix mispelling

* re-implement re-embedding

* always load base embedding to fetch counts

* format

* lint

* fix tests

* lint

* fix accept handling

* test log

* more debug

* more

* more

* more

* more

* remove logging

* logging

* jsonify

* remove debugging logs

* lint

* clean up errors a bit

* fix issue found in PR review

* PR review changes
This commit is contained in:
Bruce Martin
2020-07-30 12:31:36 -07:00
committed by GitHub
parent bd147abb3f
commit 75cb513dd9
18 changed files with 225 additions and 179 deletions
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server/data_common/data_adaptor.py
+1 -2
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@@ -71,8 +71,7 @@ class DataAdaptor(metaclass=ABCMeta):
@abstractmethod
def compute_embedding(self, method, filter):
"""compute a new embedding on the specified obs subset, and return a
tuple of (schema, fbs)."""
"""compute a new embedding on the specified obs subset, and return the embedding schema. """
pass
@abstractmethod