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Refactor czi_hosted and server into backend directory, pull common code into backend/common, refactor tests (#2102)

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* move local_server -> backend/server server-> backend/czi_hosted, pull common code into backend/common update imports, tests and make commands
This commit is contained in:
Madison Dunitz
2021-03-26 00:27:07 -05:00
committed by GitHub
parent e6e358ddc8
commit 78c9d24ed4
425 changed files with 734 additions and 5317 deletions
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backend/czi_hosted/eb/Makefile
+59
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@@ -0,0 +1,59 @@
include ../../../common.mk
.PHONY: clean
clean:
rm -f artifact.zip
rm -rf artifact.dir
# Build the ElasticBeanstalk configuration and deployment bundle,
# such that deployment can be done with a simple `eb deploy`.
# Presumes that a top-level `make build-client` has been done to
# create the client static assets.
cwd := $(shell pwd)
.PHONY: build
build: clean
mkdir artifact.dir; \
(cd ../../.. ; \
git ls-files backend/czi_hosted/ | cpio -pdm $(cwd)/artifact.dir ; ); \
$(call copy_client_assets,../../../client/build,artifact.dir/backend/czi_hosted) ; \
set -e ; \
cp app.py artifact.dir/application.py; \
cp -r ../../../backend/common artifact.dir/backend/common; \
cp ../requirements.txt artifact.dir; \
cp -r .ebextensions artifact.dir; \
if [ -d customize ] ; then \
if [ -f customize/config.yaml ] ; then \
cp customize/config.yaml artifact.dir; \
fi ; \
if [ -f customize/Dockerfile ] ; then \
cp customize/Dockerfile artifact.dir; \
fi ; \
if [ -f customize/requirements.txt ] ; then \
pip install requirements-parser ; \
pip install packaging ; \
python3 check_requirements.py ../requirements.txt customize/requirements.txt; \
cp customize/requirements.txt artifact.dir; \
fi ; \
if [ -d customize/deploy ] ; then \
mkdir -p artifact.dir/backend/czi_hosted/common/web/static/cellxgene; \
cp -r customize/deploy artifact.dir/backend/czi_hosted/common/web/static/cellxgene; \
fi; \
if [ -d customize/inline_scripts ] ; then \
cp -r customize/inline_scripts/* artifact.dir/backend/czi_hosted/common/web/templates; \
fi; \
if [ -d customize/ebextensions ] ; then \
cp -r customize/ebextensions/* artifact.dir/.ebextensions; \
fi; \
fi; \
if [ -d customize/plugins ] ; then \
cp -r customize/plugins artifact.dir/backend/czi_hosted/; \
fi; \
(cd artifact.dir; \
cp -r backend/czi_hosted/common/web/static static; \
zip -r ../artifact.zip . --exclude backend/czi_hosted/test/\* backend/czi_hosted/eb/\* ; ); \
if ! [ -f .elasticbeanstalk/config.yml ] ; then \
mkdir -p .elasticbeanstalk ; cat config_deploy.yaml >> .elasticbeanstalk/config.yml ; fi