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Refactor czi_hosted and server into backend directory, pull common code into backend/common, refactor tests (#2102)

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* move local_server -> backend/server server-> backend/czi_hosted, pull common code into backend/common update imports, tests and make commands
This commit is contained in:
Madison Dunitz
2021-03-26 00:27:07 -05:00
committed by GitHub
parent e6e358ddc8
commit 78c9d24ed4
425 changed files with 734 additions and 5317 deletions
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server/Makefile
-49
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@@ -1,49 +0,0 @@
include ../common.mk
.PHONY: clean
clean:
rm -f common/web/templates/index.html
rm -rf common/web/static
rm -f common/web/csp-hashes.json
.PHONY: unit-test
unit-test: create-test-db
PYTHONWARNINGS=ignore:ResourceWarning coverage run \
--source=app,cli,common,compute,converters,data_anndata,data_common,data_cxg \
--omit=.coverage,data_common/fbs/NetEncoding,venv \
-m unittest discover \
--start-directory test/ \
--top-level-directory ../ \
--verbose; test_result=$$?; \
$(MAKE) clean-test-db; \
exit $$test_result \
.PHONY: test-db
test-db: create-test-db
PYTHONWARNINGS=ignore:ResourceWarning coverage run \
--source=app,cli,common,compute,converters,data_anndata,data_common,data_cxg \
--omit=.coverage,data_common/fbs/NetEncoding,venv \
-m unittest discover \
--start-directory test/test_database \
--top-level-directory ../ \
--verbose; test_result=$$?; \
$(MAKE) clean-test-db; \
exit $$test_result
.PHONY: create-test-db
create-test-db:
-docker run -d -p 5432:5432 --name test_db -e POSTGRES_PASSWORD=test_pw postgres
.PHONY: clean-test-db
clean-test-db:
-docker stop test_db
-docker rm test_db
.PHONY: test-annotations-performance
test-annotations-performance:
python test/performance/performance_test_annotations_backend.py
.PHONY: test-annotations-scale
test-annotations-scale:
locust -f test/performance/scale_test_annotations.py --headless -u 30 -r 10 --host https://api.cellxgene.dev.single-cell.czi.technology/cellxgene/e/ --run-time 5m 2>&1 | tee locust_dev_stats.txt