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force categorical treatment of user annotations (#1663)
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@@ -90,10 +90,10 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
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If an array, it must be of same size as nObs and same type as Ctor
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*/
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colSchema.writable = true;
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const col = colSchema.name;
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const colName = colSchema.name;
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if (
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_getColumnSchema(this.schema, "obs", col) ||
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this._cache.obs.hasCol(col)
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_getColumnSchema(this.schema, "obs", colName) ||
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this._cache.obs.hasCol(colName)
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) {
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throw new Error("column already exists");
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}
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@@ -109,11 +109,9 @@ export default class AnnoMatrixLoader extends AnnoMatrix {
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} else {
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data = new Ctor(this.nObs).fill(value);
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}
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o._cache.obs = this._cache.obs.withCol(col, data);
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o.schema = addObsAnnoColumn(this.schema, col, {
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...colSchema,
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writable: true,
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});
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o._cache.obs = this._cache.obs.withCol(colName, data);
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_normalizeCategoricalSchema(colSchema, o._cache.obs.col(colName));
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o.schema = addObsAnnoColumn(this.schema, colName, colSchema);
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return o;
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}
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