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chore: upgrade dependencies

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atarashansky
2023-11-29 11:56:03 -08:00
parent 4bb9a2b834
commit 88c9c09ec6
35 changed files with 160 additions and 298 deletions
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server/common/compute/diffexp_generic.py
+1 -1
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@@ -56,7 +56,7 @@ def diffexp_ttest_from_mean_var(meanA, varA, nA, meanB, varB, nB, top_n, diffexp
# degrees of freedom for Welch's t-test
with np.errstate(divide="ignore", invalid="ignore"):
dof = sum_vn ** 2 / (vnA ** 2 / (nA - 1) + vnB ** 2 / (nB - 1))
dof = sum_vn**2 / (vnA**2 / (nA - 1) + vnB**2 / (nB - 1))
dof[np.isnan(dof)] = 1
# Welch's t-test score calculation