delete geneset test

This commit is contained in:
Colin Megill
2021-06-07 15:41:55 -07:00
parent 10506059d3
commit 8b9a7b4283
5 changed files with 7 additions and 111 deletions
+2 -2
View File
@@ -1,6 +1,6 @@
include ../common.mk
ANNOTATIONS := $(if $(ANNOTATIONS),$(ANNOTATIONS),../backend/test/fixtures/pbmc3k-annotations.csv)
TEST_CSVS := $(if $(ANNOTATIONS),$(ANNOTATIONS),../backend/test/fixtures/{pbmc3k-annotations.csv, pbmc3k-genesets.csv})
ANNOTATIONS_FILENAME := $(shell basename $(ANNOTATIONS))
CXG_CONFIG := $(if $(CXG_CONFIG), $(CXG_CONFIG), ./__tests__/e2e/test_config.yaml)
@@ -41,7 +41,7 @@ smoke-test:
.PHONY: smoke-test-annotations
smoke-test-annotations:
$(eval TMP_DIR := $(shell mktemp -d /tmp/cellxgene_XXXXXX))
cp $(ANNOTATIONS) $(TMP_DIR)/ && \
cp $(TEST_CSVS) $(TMP_DIR)/ && \
start_server_and_test \
'CXG_OPTIONS="--annotations-file $(TMP_DIR)/$(ANNOTATIONS_FILENAME)" $(MAKE) start-server' \
$(CXG_SERVER_PORT) \