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https://github.com/chanzuckerberg/cellxgene.git
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delete geneset test
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@@ -1,6 +1,6 @@
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include ../common.mk
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ANNOTATIONS := $(if $(ANNOTATIONS),$(ANNOTATIONS),../backend/test/fixtures/pbmc3k-annotations.csv)
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TEST_CSVS := $(if $(ANNOTATIONS),$(ANNOTATIONS),../backend/test/fixtures/{pbmc3k-annotations.csv, pbmc3k-genesets.csv})
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ANNOTATIONS_FILENAME := $(shell basename $(ANNOTATIONS))
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CXG_CONFIG := $(if $(CXG_CONFIG), $(CXG_CONFIG), ./__tests__/e2e/test_config.yaml)
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@@ -41,7 +41,7 @@ smoke-test:
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.PHONY: smoke-test-annotations
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smoke-test-annotations:
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$(eval TMP_DIR := $(shell mktemp -d /tmp/cellxgene_XXXXXX))
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cp $(ANNOTATIONS) $(TMP_DIR)/ && \
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cp $(TEST_CSVS) $(TMP_DIR)/ && \
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start_server_and_test \
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'CXG_OPTIONS="--annotations-file $(TMP_DIR)/$(ANNOTATIONS_FILENAME)" $(MAKE) start-server' \
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$(CXG_SERVER_PORT) \
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