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Fix float16 support [#2379] (#2483)

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* Fix float16 support [#2379]

Convert to float32 on startup unless backed, in which case error. scipy does not support complex slicing from float16 data so this is the easiest fix for now.

* minor msg change
This commit is contained in:
Ben MR
2022-02-10 15:20:47 -08:00
committed by GitHub
parent ceb0cc6f27
commit 8bac98f25c
4 changed files with 32 additions and 1 deletions
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test/unit/data_anndata/test_anndata_adaptor.py
+1 -1
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@@ -1,5 +1,4 @@
import json
import sys
import time
import unittest
@@ -37,6 +36,7 @@ Test the anndata adaptor using the pbmc3k data set.
(f"{FIXTURES_ROOT}/pbmc3k-CSC-gz.h5ad", True, "normal"),
(f"{FIXTURES_ROOT}/pbmc3k-CSR-gz.h5ad", True, "normal"),
(f"{FIXTURES_ROOT}/pbmc3k_64.h5ad", False, "auto"), # 64 bit conversion tests
(f"{FIXTURES_ROOT}/pbmc3k_16.h5ad", False, "auto"), # 16 bit conversion tests
],
)
class AdaptorTest(unittest.TestCase):