type catchErrorsWrap callsite

client/src/actions/embedding.ts

@@ -2,7 +2,9 @@
 action creators related to embeddings choice
 */
 
+import { Dispatch } from "redux";
 import { AnnoMatrixObsCrossfilter } from "../annoMatrix";
+import type { RootState } from "../reducers";
 import { _setEmbeddingSubset } from "../util/stateManager/viewStackHelpers";
 
 // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
@@ -29,21 +31,15 @@ export async function _switchEmbedding(
   return [annoMatrix, obsCrossfilter];
 }
 
-// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
-export const layoutChoiceAction = (newLayoutChoice: any) => async (
-  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
-  dispatch: any,
-  // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
-  getState: any
-) => {
+export const layoutChoiceAction =
+  (newLayoutChoice: string) =>
+  async (dispatch: Dispatch, getState: () => RootState): Promise<void> => {
     /*
   On layout choice, make sure we have selected all on the previous layout, AND the new
   layout.
   */
-  const {
-    annoMatrix: prevAnnoMatrix,
-    obsCrossfilter: prevCrossfilter,
-  } = getState();
+    const { annoMatrix: prevAnnoMatrix, obsCrossfilter: prevCrossfilter } =
+      getState();
     const [annoMatrix, obsCrossfilter] = await _switchEmbedding(
       prevAnnoMatrix,
       prevCrossfilter,
@@ -55,4 +51,4 @@ export const layoutChoiceAction = (newLayoutChoice: any) => async (
       obsCrossfilter,
       annoMatrix,
     });
-};
+  };

client/src/actions/index.ts

@@ -1,3 +1,5 @@
+import { Dispatch } from "redux";
+
 import * as globals from "../globals";
 import { AnnoMatrixLoader, AnnoMatrixObsCrossfilter } from "../annoMatrix";
 import {
@@ -11,6 +13,8 @@ import * as annoActions from "./annotation";
 import * as viewActions from "./viewStack";
 import * as embActions from "./embedding";
 import * as genesetActions from "./geneset";
+import { LayoutColumn, Schema } from "../common/types/entities";
+import { RootState } from "../reducers";
 
 // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
 function setGlobalConfig(config: any) {
@@ -36,8 +40,8 @@ async function userColorsFetchAndLoad(dispatch: any) {
   );
 }
 
-async function schemaFetch() {
-  return fetchJson("schema");
+async function schemaFetch(): Promise<{ schema: Schema }> {
+  return (await fetchJson("schema")) as { schema: Schema };
 }
 
 // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
@@ -104,17 +108,17 @@ function prefetchEmbeddings(annoMatrix: any) {
 /*
 Application bootstrap
 */
-// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types --- FIXME: disabled temporarily on migrate to TS.
-const doInitialDataLoad = () =>
-  // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
-  catchErrorsWrap(async (dispatch: any) => {
+const doInitialDataLoad = (): ((
+  dispatch: Dispatch,
+  getState: () => RootState
+) => void) =>
+  catchErrorsWrap(async (dispatch: Dispatch) => {
     dispatch({ type: "initial data load start" });
 
     try {
       const [config, schema] = await Promise.all([
         configFetch(dispatch),
-        // @ts-expect-error ts-migrate(2554) FIXME: Expected 0 arguments, but got 1.
-        schemaFetch(dispatch),
+        schemaFetch(),
         userColorsFetchAndLoad(dispatch),
         userInfoFetch(dispatch),
       ]);
@@ -137,10 +141,9 @@ const doInitialDataLoad = () =>
       const layoutSchema = schema?.schema?.layout?.obs ?? [];
       if (
         defaultEmbedding &&
-        // eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
-        layoutSchema.some((s: any) => s.name === defaultEmbedding)
+        layoutSchema.some((s: LayoutColumn) => s.name === defaultEmbedding)
       ) {
-        dispatch(embActions.layoutChoiceAction(defaultEmbedding));
+        embActions.layoutChoiceAction(defaultEmbedding);
       }
     } catch (error) {
       dispatch({ type: "initial data load error", error });
@@ -188,14 +191,16 @@ const dispatchDiffExpErrors = (dispatch: any, response: any) => {
   }
 };
 
-const requestDifferentialExpression = (
+const requestDifferentialExpression =
+  (
     // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     set1: any,
     // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
     set2: any,
     num_genes = 50
     // eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
-) => async (dispatch: any, getState: any) => {
+  ) =>
+  async (dispatch: any, getState: any) => {
     dispatch({ type: "request differential expression started" });
     try {
       /*
@@ -262,10 +267,9 @@ const requestDifferentialExpression = (
         error,
       });
     }
-};
+  };
 
-// eslint-disable-next-line @typescript-eslint/no-explicit-any --- FIXME: disabled temporarily on migrate to TS.
-function fetchJson(pathAndQuery: any) {
+function fetchJson(pathAndQuery: string) {
   return doJsonRequest(
     `${globals.API.prefix}${globals.API.version}${pathAndQuery}`
   );

client/src/components/framework/toasters.ts

@@ -26,8 +26,10 @@ export const keepAroundErrorToast = (message: any) =>
 /*
 a hard network error
 */
-// eslint-disable-next-line @typescript-eslint/explicit-module-boundary-types, @typescript-eslint/no-explicit-any -- - FIXME: disabled temporarily on migrate to TS.
-export const postNetworkErrorToast = (message: any, key = undefined) =>
+export const postNetworkErrorToast = (
+  message: string,
+  key: string | undefined = undefined
+): string =>
   ToastTopCenter.show(
     {
       message,