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Code Issues Packages Projects Releases Wiki Activity

annotations cli updates (#1190)

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* Switch logic from `--annotations` to `--disable-annotations

* Rename `--annotations-file` --> `--annotations-input-file` and remove `experimental`

* update docs

* update makefile

* update tests

* Disable annotations on standard client smoke test

* Update docs/posts/annotations.md

Co-Authored-By: Matt Weiden <538456+mweiden@users.noreply.github.com>

* Update docs/posts/annotations.md

* Renaming

* Docs

* Update tests

* Pesky typo -_-

Co-authored-by: Matt Weiden <538456+mweiden@users.noreply.github.com>
This commit is contained in:
Sidney Bell
2020-03-11 11:57:52 -07:00
committed by GitHub
co-authored by Matt Weiden
parent 8beeb57c96
commit 9089fc98f2
7 changed files with 50 additions and 55 deletions
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server/common/app_config.py
+1 -1
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@@ -110,7 +110,7 @@ class AppConfig(object):
"enable-reembedding": self.enable_reembedding,
"annotations": False,
"annotations_file": None,
"annotations_output_dir": None,
"annotations_dir": None,
"annotations_cell_ontology_enabled": False,
"annotations_cell_ontology_obopath": None,
"annotations_cell_ontology_terms": None,