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TS migration. #2288. (#2328)

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* Added TS. Updated build and linting config. Added types.

* [ts-migrate][.] Rename files from JS/JSX to TS/TSX

Co-authored-by: ts-migrate <>

* [ts-migrate][.] Run TS Migrate

Co-authored-by: ts-migrate <>

* Corrected files mangled by ts-migrate.

* Updated lint config, minor linting.

* Re-enabled Husky.

* Updated tests and config.

* Reverted webpack devtool config.

* Removed obsolete snapshots.

* Added annotations snap.

* Updated tsconfig includes wrt linting.

* Removed ts-migrate.

Co-authored-by: Timmy Huang <tihuan@users.noreply.github.com>
This commit is contained in:
Mim Hastie
2021-07-26 20:18:17 +00:00
committed by GitHub
co-authored by ts-migrate Timmy Huang
parent 7328cbdbd5
commit 934cc5c69b
206 changed files with 4719 additions and 2085 deletions
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client/src/annoMatrix/viewCreators.js
-70
View File
@@ -1,70 +0,0 @@
/*
View creators. These are helper functions which create new views from existing
instances of AnnoMatrix, implementing common UI functions.
*/
import { AnnoMatrixRowSubsetView, AnnoMatrixClipView } from "./views";
export function isubsetMask(annoMatrix, obsMask) {
/*
Subset annomatrix to contain the rows which have truish value in the mask.
Maks length must equal annoMatrix.nObs (row count).
*/
return isubset(annoMatrix, _maskToList(obsMask));
}
export function isubset(annoMatrix, obsOffsets) {
/*
Subset annomatrix to contain the positions contained in the obsOffsets array
Example:
isubset(annoMatrix, [0, 1]) -> annoMatrix with only the first two rows
*/
const obsIndex = annoMatrix.rowIndex.isubset(obsOffsets);
return new AnnoMatrixRowSubsetView(annoMatrix, obsIndex);
}
export function subset(annoMatrix, obsLabels) {
/*
subset based on labels
*/
const obsIndex = annoMatrix.rowIndex.subset(obsLabels);
return new AnnoMatrixRowSubsetView(annoMatrix, obsIndex);
}
export function subsetByIndex(annoMatrix, obsIndex) {
/*
subset based upon the new obs index.
*/
return new AnnoMatrixRowSubsetView(annoMatrix, obsIndex);
}
export function clip(annoMatrix, qmin, qmax) {
/*
Create a view that clips all continuous data to the [min, max] range.
The matrix shape does not change, but the continuous values outside the
specified range will become a NaN.
*/
return new AnnoMatrixClipView(annoMatrix, qmin, qmax);
}
/*
Private utility functions below
*/
function _maskToList(mask) {
/* convert masks to lists - method wastes space, but is fast */
if (!mask) {
return null;
}
const list = new Int32Array(mask.length);
let elems = 0;
for (let i = 0, l = mask.length; i < l; i += 1) {
if (mask[i]) {
list[elems] = i;
elems += 1;
}
}
return list.subarray(0, elems);
}