TS migration. #2288. (#2328)

* Added TS. Updated build and linting config. Added types.

* [ts-migrate][.] Rename files from JS/JSX to TS/TSX

Co-authored-by: ts-migrate <>

* [ts-migrate][.] Run TS Migrate

Co-authored-by: ts-migrate <>

* Corrected files mangled by ts-migrate.

* Updated lint config, minor linting.

* Re-enabled Husky.

* Updated tests and config.

* Reverted webpack devtool config.

* Removed obsolete snapshots.

* Added annotations snap.

* Updated tsconfig includes wrt linting.

* Removed ts-migrate.

Co-authored-by: Timmy Huang <tihuan@users.noreply.github.com>
This commit is contained in:
Mim Hastie
2021-07-26 20:18:17 +00:00
committed by GitHub
co-authored by ts-migrate Timmy Huang
parent 7328cbdbd5
commit 934cc5c69b
206 changed files with 4719 additions and 2085 deletions
@@ -1,190 +0,0 @@
import React from "react";
import { connect } from "react-redux";
import {
Button,
Classes,
Code,
Colors,
Dialog,
InputGroup,
Tooltip,
} from "@blueprintjs/core";
@connect((state) => ({
idhash: state.config?.parameters?.["annotations-user-data-idhash"] ?? null,
annotations: state.annotations,
auth: state.config?.authentication,
userInfo: state.userInfo,
writableCategoriesEnabled: state.config?.parameters?.annotations ?? false,
writableGenesetsEnabled: !(
state.config?.parameters?.annotations_genesets_readonly ?? true
),
}))
class FilenameDialog extends React.Component {
constructor(props) {
super(props);
this.state = {
filenameText: "",
};
}
dismissFilenameDialog = () => {};
handleCreateFilename = () => {
const { dispatch } = this.props;
const { filenameText } = this.state;
dispatch({
type: "set annotations collection name",
data: filenameText,
});
};
filenameError = () => {
const legalNames = /^\w+$/;
const { filenameText } = this.state;
let err = false;
if (filenameText === "") {
err = "empty_string";
} else if (!legalNames.test(filenameText)) {
/*
IMPORTANT: this test must ultimately match the test applied by the
backend, which is designed to ensure a safe file name can be created
from the data collection name. If you change this, you will also need
to change the validation code in the backend, or it will have no effect.
*/
err = "characters";
}
return err;
};
filenameErrorMessage = () => {
const err = this.filenameError();
let markup = null;
if (err === "empty_string") {
markup = (
<span
style={{
fontStyle: "italic",
fontSize: 12,
marginTop: 5,
color: Colors.ORANGE3,
}}
>
Name cannot be blank
</span>
);
} else if (err === "characters") {
markup = (
<span
style={{
fontStyle: "italic",
fontSize: 12,
marginTop: 5,
color: Colors.ORANGE3,
}}
>
Only alphanumeric and underscore allowed
</span>
);
}
return markup;
};
render() {
const {
writableCategoriesEnabled,
writableGenesetsEnabled,
annotations,
idhash,
userInfo,
} = this.props;
const { filenameText } = this.state;
return (writableCategoriesEnabled || writableGenesetsEnabled) &&
annotations.promptForFilename &&
!annotations.dataCollectionNameIsReadOnly &&
!annotations.dataCollectionName &&
userInfo.is_authenticated ? (
<Dialog
icon="tag"
title="User Generated Data Directory"
isOpen={!annotations.dataCollectionName}
onClose={this.dismissFilenameDialog}
>
<form
onSubmit={(e) => {
e.preventDefault();
this.handleCreateFilename();
}}
>
<div className={Classes.DIALOG_BODY} data-testid="annotation-dialog">
<div style={{ marginBottom: 20 }}>
<p>Name your user generated data directory:</p>
<InputGroup
autoFocus
value={filenameText}
intent={this.filenameError(filenameText) ? "warning" : "none"}
onChange={(e) =>
this.setState({ filenameText: e.target.value })
}
leftIcon="tag"
data-testid="new-annotation-name"
/>
<p
style={{
marginTop: 7,
visibility: this.filenameError(filenameText)
? "visible"
: "hidden",
color: Colors.ORANGE3,
}}
>
{this.filenameErrorMessage(filenameText)}
</p>
</div>
<div>
<p>
{"Your annotations are stored in this file: "}
<Code>
{filenameText}-cell-labels-{idhash}.csv
</Code>
</p>
<p>
{"Your gene sets are stored in this file: "}
<Code>
{filenameText}-gene-sets-{idhash}.csv
</Code>
</p>
<p style={{ fontStyle: "italic" }}>
(We added a unique ID to your filename)
</p>
</div>
</div>
<div className={Classes.DIALOG_FOOTER}>
<div className={Classes.DIALOG_FOOTER_ACTIONS}>
<Tooltip content="Cancel naming collection">
<Button onClick={this.dismissFilenameDialog}>Cancel</Button>
</Tooltip>
<Button
disabled={!filenameText || this.filenameError(filenameText)}
onClick={this.handleCreateFilename}
intent="primary"
type="submit"
data-testid="submit-annotation"
>
Create user generated data directory
</Button>
</div>
</div>
</form>
</Dialog>
) : null;
}
}
export default FilenameDialog;