Clip continuous values based on percentile cutoffs (#672)

* Add numeric inputs for percentiles

* Define initial values for percentile cutoffs in world reducer

* add percentil to crossfilter dimensions

* worldEqUniverse now handles cloned worlds

* add Dataframe.mapColumns

* Wire up handlers for percentile inputs

* World reducer and stateManager know about continuousPercentileMin/Max

* Create world as universe clone (not pointer) to avoid clobbering vals

* Define basic actions for setting continuousPercentileMin/Max

* Under the hood, deal with percentiles between 0 and 1

* Move percentile inputs to visualization settings menu

* Fix padding for undo/redo buttons

* Trigger world rebuild from percentile actions

* BROKEN - pseudocode for clamping dataframe by percentiles upon world rebuild

* fix error handling on clip quantiles; start world clipping implementation

* more unclipped reorg

* rename crossfilter.percentile to quantile

* simplify schema access

* update continuous legend when scale changes

* update color cache when clip changes

* clip obs annotations and var data when clip quantile changes

* use own fromEntries

* fix tests

* stable non-finite float sort/search

* clarify comments

* fix syntax typo

* use new stand-alone clip

* clip expresssion data

* add select tests for non-finite scalars

* basic styles

* clip UI now requires explicit commit

* reset enable/disable accounts for clip percentiles

* better error messages

* fix bug in undo interaction with programatic min brush selection

* small refactoring

* support clipping of int data

* do not perform unnecessary summarizations

* improve caching of dataframe compiled columns

* add percentile precompute to Dataframe.summarize

* use Dataframe.summarize for clip percentiles

* remove obsolete quantile code from corssfilter

* histogram scale and label Y axis, add unclipped X range labels

* layout tweaks

* scatterplot now updates when clip changes

* improve comments

* remove debugging comment

* rework clip number entry validation for usability

* ui tweaks to histogram colors and layout

* enable undo/redo for clip user action

* refine UI on clip value entry

* api cleanup

* update confusing comment

* clarify purpose of isValidDigitKeyEvent

* fix misleading comment

* apply appropriate button-group classes; do not mix span and div

* variable name and comment changes suggested in PR review

* rename sort to sortArray; remove unused and dead code path

* naming changes suggested in PR review

* code review improvements for clarity

* more small changes from PR review

* lint fixes for PR review

* fix spelling error

* clarify that function performs in-place modification of world

* add comment to clarify intent of range operation

* fix bad indents in comments

* clean up __columnsAccessor comments and code

* improve comments around clipPredicate

* field name consistency

* improve comment on quantiles params
This commit is contained in:
Sidney Bell
2019-04-30 16:20:10 -07:00
committed by Bruce Martin
parent 9f10d8095a
commit a08e19bbd0
34 changed files with 1842 additions and 551 deletions
+46 -16
View File
@@ -1049,12 +1049,12 @@
}
},
"@blueprintjs/core": {
"version": "3.8.0",
"resolved": "https://registry.npmjs.org/@blueprintjs/core/-/core-3.8.0.tgz",
"integrity": "sha512-maw63uME+spdyDUOJH47r+YRc8kDeux8kQz4poiAQKk4eJavc160/aU7w5k4sV29mVputp7P22qNY1oBNXjtDQ==",
"version": "3.15.0",
"resolved": "https://registry.npmjs.org/@blueprintjs/core/-/core-3.15.0.tgz",
"integrity": "sha512-znXO0UaWBJO7Nm2qEvZzURCDuogsJ9DJlIw3N2XnIi+k/c8mQ1xlvtg0TT2pS88lMG9HUEKky3b0UQaSXBw4LA==",
"requires": {
"@blueprintjs/icons": "^3.3.0",
"@types/dom4": "^2.0.0",
"@blueprintjs/icons": "^3.7.0",
"@types/dom4": "^2.0.1",
"classnames": "^2.2",
"dom4": "^2.0.1",
"normalize.css": "^8.0.0",
@@ -1063,6 +1063,17 @@
"react-transition-group": "^2.2.1",
"resize-observer-polyfill": "^1.5.0",
"tslib": "^1.9.0"
},
"dependencies": {
"@blueprintjs/icons": {
"version": "3.8.0",
"resolved": "https://registry.npmjs.org/@blueprintjs/icons/-/icons-3.8.0.tgz",
"integrity": "sha512-yHaRQ3vfV9Gf3foZ4ONtxddz+u5ufkHqHj8Ia5VhPbFgG4el+cPdmsGGIIM72rgKS1KQa5Ay+ggjpByUlXvrKg==",
"requires": {
"classnames": "^2.2",
"tslib": "^1.9.0"
}
}
}
},
"@blueprintjs/icons": {
@@ -5524,7 +5535,8 @@
"ansi-regex": {
"version": "2.1.1",
"bundled": true,
"dev": true
"dev": true,
"optional": true
},
"aproba": {
"version": "1.2.0",
@@ -5545,12 +5557,14 @@
"balanced-match": {
"version": "1.0.0",
"bundled": true,
"dev": true
"dev": true,
"optional": true
},
"brace-expansion": {
"version": "1.1.11",
"bundled": true,
"dev": true,
"optional": true,
"requires": {
"balanced-match": "^1.0.0",
"concat-map": "0.0.1"
@@ -5565,17 +5579,20 @@
"code-point-at": {
"version": "1.1.0",
"bundled": true,
"dev": true
"dev": true,
"optional": true
},
"concat-map": {
"version": "0.0.1",
"bundled": true,
"dev": true
"dev": true,
"optional": true
},
"console-control-strings": {
"version": "1.1.0",
"bundled": true,
"dev": true
"dev": true,
"optional": true
},
"core-util-is": {
"version": "1.0.2",
@@ -5692,7 +5709,8 @@
"inherits": {
"version": "2.0.3",
"bundled": true,
"dev": true
"dev": true,
"optional": true
},
"ini": {
"version": "1.3.5",
@@ -5704,6 +5722,7 @@
"version": "1.0.0",
"bundled": true,
"dev": true,
"optional": true,
"requires": {
"number-is-nan": "^1.0.0"
}
@@ -5718,6 +5737,7 @@
"version": "3.0.4",
"bundled": true,
"dev": true,
"optional": true,
"requires": {
"brace-expansion": "^1.1.7"
}
@@ -5725,12 +5745,14 @@
"minimist": {
"version": "0.0.8",
"bundled": true,
"dev": true
"dev": true,
"optional": true
},
"minipass": {
"version": "2.2.4",
"bundled": true,
"dev": true,
"optional": true,
"requires": {
"safe-buffer": "^5.1.1",
"yallist": "^3.0.0"
@@ -5749,6 +5771,7 @@
"version": "0.5.1",
"bundled": true,
"dev": true,
"optional": true,
"requires": {
"minimist": "0.0.8"
}
@@ -5829,7 +5852,8 @@
"number-is-nan": {
"version": "1.0.1",
"bundled": true,
"dev": true
"dev": true,
"optional": true
},
"object-assign": {
"version": "4.1.1",
@@ -5841,6 +5865,7 @@
"version": "1.4.0",
"bundled": true,
"dev": true,
"optional": true,
"requires": {
"wrappy": "1"
}
@@ -5926,7 +5951,8 @@
"safe-buffer": {
"version": "5.1.1",
"bundled": true,
"dev": true
"dev": true,
"optional": true
},
"safer-buffer": {
"version": "2.1.2",
@@ -5962,6 +5988,7 @@
"version": "1.0.2",
"bundled": true,
"dev": true,
"optional": true,
"requires": {
"code-point-at": "^1.0.0",
"is-fullwidth-code-point": "^1.0.0",
@@ -5981,6 +6008,7 @@
"version": "3.0.1",
"bundled": true,
"dev": true,
"optional": true,
"requires": {
"ansi-regex": "^2.0.0"
}
@@ -6024,12 +6052,14 @@
"wrappy": {
"version": "1.0.2",
"bundled": true,
"dev": true
"dev": true,
"optional": true
},
"yallist": {
"version": "3.0.2",
"bundled": true,
"dev": true
"dev": true,
"optional": true
}
}
},