From a1c46170b96bd59db2bf55be3671f3b315bd18b6 Mon Sep 17 00:00:00 2001 From: Bruce Martin Date: Mon, 26 Jul 2021 14:32:46 -0700 Subject: [PATCH] update compat workflow to match latest deps (#2335) * update compat workflow to match latest deps * attempt to debug * attempt to debug * remove debugging code * typo --- .github/workflows/compatibility_tests.yml | 6 ++---- 1 file changed, 2 insertions(+), 4 deletions(-) diff --git a/.github/workflows/compatibility_tests.yml b/.github/workflows/compatibility_tests.yml index 8ec9309e..190dbd29 100644 --- a/.github/workflows/compatibility_tests.yml +++ b/.github/workflows/compatibility_tests.yml @@ -28,8 +28,8 @@ jobs: continue-on-error: true strategy: matrix: - python-version: [3.6, 3.7] # As of Oct 2020 Anndata is not compatible with 3.8 - anndata-version: [0.7.0, 0.7.1, 0.7.2, 0.7.3, 0.7.4, 0.7.5] + python-version: [3.6, 3.7, 3.8] + anndata-version: [0.7.6] test-suite: [smoke-test, smoke-test-annotations] steps: - uses: actions/checkout@v2 @@ -47,8 +47,6 @@ jobs: make pydist install-dist # 3. install anndata pip install anndata==${{ matrix.anndata-version }} - # workaround for anndata 0.6.22.post1 bug - [[ "0.6.22.post1" = "${{ matrix.anndata-version }}" ]] && pip install h5py==2.9.0 || true - name: Tests run: make unit-test ${{ matrix.test-suite }}