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Limit pytest ignore warning to only one specific warning

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Charlotte Weaver
2018-08-13 15:00:06 -07:00
parent d44d267bda
commit a29ba8da4e
3 changed files with 3 additions and 4 deletions
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pytest.ini
-3
View File
@@ -1,3 +0,0 @@
[pytest]
filterwarnings =
ignore::UserWarning
server/test/test_api.py
-1
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@@ -51,4 +51,3 @@ class EndPoints(unittest.TestCase):
url = "{base}{endpoint}".format(base=self.url_base, endpoint="diffexpression") url = "{base}{endpoint}".format(base=self.url_base, endpoint="diffexpression")
result = self.session.post(url, data=json.dumps({"celllist1": ["AAACATACAACCAC-1", "AACCGATGGTCATG-1"], "celllist2": ["CCGATAGACCTAAG-1", "GGTGGAGAAGTAGA-1"]}), headers={'content-type': 'application/json'}) result = self.session.post(url, data=json.dumps({"celllist1": ["AAACATACAACCAC-1", "AACCGATGGTCATG-1"], "celllist2": ["CCGATAGACCTAAG-1", "GGTGGAGAAGTAGA-1"]}), headers={'content-type': 'application/json'})
assert result.status_code == 200 assert result.status_code == 200
server/test/test_scanpy_engine.py
+3
View File
@@ -1,4 +1,5 @@
import unittest import unittest
import pytest
from server.app.scanpy_engine.scanpy_engine import ScanpyEngine from server.app.scanpy_engine.scanpy_engine import ScanpyEngine
@@ -19,9 +20,11 @@ class UtilTest(unittest.TestCase):
self.assertIn("name", self.data.data.var) self.assertIn("name", self.data.data.var)
self.assertEqual(list(self.data.data.var.index), list(range(1838))) self.assertEqual(list(self.data.data.var.index), list(range(1838)))
@pytest.mark.filterwarnings("ignore:Scanpy data matrix")
def test_data_type(self): def test_data_type(self):
self.data.data.X = self.data.data.X.astype("float64") self.data.data.X = self.data.data.X.astype("float64")
self.assertWarns(UserWarning, self.data._validatate_data_types()) self.assertWarns(UserWarning, self.data._validatate_data_types())
if __name__ == '__main__': if __name__ == '__main__':
unittest.main() unittest.main()