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update gene set name validation to match latest requirements (#2117)

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Bruce Martin
2021-03-22 14:54:12 -07:00
committed by GitHub
parent 8d932fb47d
commit a89362c1ad
2 changed files with 59 additions and 12 deletions
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local_server/test/unit/common/test_api.py
+51 -3
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@@ -568,8 +568,26 @@ summary test,,PIGU,\r
result = self.session.put(url, json=test1)
self.assertEqual(result.status_code, HTTPStatus.NOT_FOUND)
test2 = {"tid": 4, "genesets": [{"geneset_name": "foobar", "genes": []}]}
test2_response = {"tid": 4, "genesets": [{"geneset_name": "foobar", "geneset_description": "", "genes": []}]}
test2 = {
"tid": 4,
"genesets": [
{"geneset_name": "foobar", "genes": []},
{"geneset_name": "contains a space", "genes": []},
{"geneset_name": "contains_weird_characters: #$%^&*()_+=-!@<>,./?';:\"[]{}|\\", "genes": []},
],
}
test2_response = {
"tid": 4,
"genesets": [
{"geneset_name": "foobar", "geneset_description": "", "genes": []},
{"geneset_name": "contains a space", "geneset_description": "", "genes": []},
{
"geneset_name": "contains_weird_characters: #$%^&*()_+=-!@<>,./?';:\"[]{}|\\",
"geneset_description": "",
"genes": [],
},
],
}
result = self.session.put(url, json=test2)
self.assertEqual(result.status_code, HTTPStatus.OK)
result = self.session.get(url, headers={"Accept": "application/json"})
@@ -629,7 +647,37 @@ summary test,,PIGU,\r
# illegal geneset_name
test_case(
{"tid": tid + 1, "genesets": [{"geneset_name": "&quot;", "genes": []}]},
{"tid": tid + 1, "genesets": [{"geneset_name": " foo", "genes": []}]},
HTTPStatus.BAD_REQUEST,
original_data,
)
test_case(
{"tid": tid + 1, "genesets": [{"geneset_name": "foo ", "genes": []}]},
HTTPStatus.BAD_REQUEST,
original_data,
)
test_case(
{"tid": tid + 1, "genesets": [{"geneset_name": "f oo", "genes": []}]},
HTTPStatus.BAD_REQUEST,
original_data,
)
test_case(
{"tid": tid + 1, "genesets": [{"geneset_name": "f\too", "genes": []}]},
HTTPStatus.BAD_REQUEST,
original_data,
)
test_case(
{"tid": tid + 1, "genesets": [{"geneset_name": "f\roo", "genes": []}]},
HTTPStatus.BAD_REQUEST,
original_data,
)
test_case(
{"tid": tid + 1, "genesets": [{"geneset_name": "f\noo", "genes": []}]},
HTTPStatus.BAD_REQUEST,
original_data,
)
test_case(
{"tid": tid + 1, "genesets": [{"geneset_name": "f\voo", "genes": []}]},
HTTPStatus.BAD_REQUEST,
original_data,
)