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[WIP] Patch for anndata 0.7 (#1132)

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* Fix JSON encoding bug introduced by anndata 0.7

* Add anndata csr and csc classes to allowed matrix proxy inputs
This commit is contained in:
Sidney Bell
2020-01-28 16:12:43 -08:00
committed by GitHub
parent 3dd50e5676
commit a927d733c2
4 changed files with 22 additions and 19 deletions
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server/app/util/matrix_proxy.py
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@@ -73,6 +73,8 @@ class MatrixProxy(_ArrayProxyBase):
"numpy.ndarray": True,
"scipy.sparse.csc.csc_matrix": True,
"scipy.sparse.csr.csr_matrix": True,
"anndata._core.sparse_dataset.backed_csr_matrix": "MatrixProxy_anndata_h5py",
"anndata._core.sparse_dataset.backed_csc_matrix": "MatrixProxy_anndata_h5py",
}
proxy_registry = None
last_cache_token = None