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Code Issues Packages Projects Releases Wiki Activity

remove psutil (#773)

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This commit is contained in:
Charlotte Weaver
2019-05-18 10:53:45 -07:00
committed by Bruce Martin
parent 82d65addec
commit ab4c74a321
2 changed files with 0 additions and 5 deletions
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server/cli/launch.py
-4
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@@ -7,7 +7,6 @@ import warnings
import webbrowser import webbrowser
import click import click
import psutil
from server.app.app import Server from server.app.app import Server
from server.app.util.errors import ScanpyFileError from server.app.util.errors import ScanpyFileError
@@ -165,9 +164,6 @@ security risk by including the --scripts flag. Make sure you trust the scripts t
click.echo(f"[cellxgene] Loading data from {basename(data)}, this may take awhile...") click.echo(f"[cellxgene] Loading data from {basename(data)}, this may take awhile...")
else: else:
click.echo(f"[cellxgene] Loading data from {basename(data)}.") click.echo(f"[cellxgene] Loading data from {basename(data)}.")
# if file is larger than main memory, let the user know performance may suffer
if file_size > .95 * psutil.virtual_memory().total:
click.echo(f"[cellxgene] Warning: data file is larger than RAM - application may be very slow.")
# Fix for anaconda python. matplotlib typically expects python to be installed as a framework TKAgg is usually # Fix for anaconda python. matplotlib typically expects python to be installed as a framework TKAgg is usually
# available and fixes this issue. See https://matplotlib.org/faq/virtualenv_faq.html # available and fixes this issue. See https://matplotlib.org/faq/virtualenv_faq.html
server/requirements.txt
-1
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@@ -9,7 +9,6 @@ flatbuffers>=1.10.0
matplotlib>=2.2 matplotlib>=2.2
numpy>=1.15.2 numpy>=1.15.2
pandas>=0.23.1 pandas>=0.23.1
psutil>=5.6.2
scanpy>=1.3.7 scanpy>=1.3.7
scipy>=1.1.0,<1.3 scipy>=1.1.0,<1.3
scikit-learn>=0.19.1,!=0.20.0 scikit-learn>=0.19.1,!=0.20.0