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Collect all env vars in one, easy-to-find place (#1149)

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* Collect all env vars in one, easy-to-find place

Past state:
* Default environement variables were stored in both client/package.json
and client/__tests__/e2e/config.js
* Constants that should have been linked--like the cellxgene server port
during testing--were repeated.

With this commit:
* All environment variables are parameterized
* All environment variables are packaged in default env files

* Move npm scripts to client Makefile

* Respond to feedback from @seve and @bkmartinjr
This commit is contained in:
Matt Weiden
2020-02-12 12:50:48 -08:00
committed by GitHub
parent 5340a5f951
commit ac13b31e13
16 changed files with 777 additions and 287 deletions
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client/package.json
+3 -12
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@@ -5,20 +5,11 @@
"description": "cellxgene is a web application for the interactive exploration of single cell sequence data.",
"repository": "https://github.com/chanzuckerberg/cellxgene",
"scripts": {
"backend-dev": "python3.6 -m venv cellxgene && source cellxgene/bin/activate && yes | pip uninstall cellxgene || true && pip install -e .. && cellxgene launch ",
"backend-dev-anno-ontology": "python3.6 -m venv cellxgene && source cellxgene/bin/activate && yes | pip uninstall cellxgene || true && pip install -e .. && cellxgene launch --experimental-annotations --experimental-annotations-ontology",
"backend-dev-anno": "python3.6 -m venv cellxgene && source cellxgene/bin/activate && yes | pip uninstall cellxgene || true && pip install -e .. && cellxgene launch --experimental-annotations",
"build": "npm run clean && webpack --config configuration/webpack/webpack.config.prod.js",
"clean": "rimraf build",
"build": "npm run clean && webpack --config configuration/webpack/webpack.config.prod.js",
"dev": "npm run clean && webpack --config configuration/webpack/webpack.config.dev.js",
"e2e": "node node_modules/jest/bin/jest.js --verbose false --config __tests__/e2e/e2eJestConfig.json e2e/e2e.test.js",
"fmt": "eslint --fix src",
"lint": "eslint src",
"smoke-test": "start-server-and-test start-server-for-test :5000 e2e",
"start": "node server/development.js",
"start-server-for-test": "cellxgene launch -p 5000 ../example-dataset/pbmc3k.h5ad",
"test": "node node_modules/jest/bin/jest.js",
"unit-test": "node node_modules/jest/bin/jest.js --testPathIgnorePatterns e2e"
"lint": "eslint src"
},
"engineStrict": true,
"engines": {
@@ -37,6 +28,7 @@
"@blueprintjs/core": "^3.22.3",
"@blueprintjs/icons": "^3.13.0",
"@blueprintjs/select": "^3.11.2",
"client": "0.0.1",
"d3": "^4.10.0",
"d3-scale-chromatic": "^1.5.0",
"flatbuffers": "^1.11.0",
@@ -101,7 +93,6 @@
"puppeteer": "^2.1.1",
"rimraf": "^3.0.1",
"serve-favicon": "^2.3.0",
"start-server-and-test": "^1.10.6",
"style-loader": "^1.1.3",
"sw-precache-webpack-plugin": "^1.0.0",
"url-loader": "^3.0.0",