wire up geneset reducer (#2082)

* first cut at GET /genesets route

* update existing tests to match code changes

* more GET /genesets and initial tests

* add missing test fixture

* geneset validation accepts OTA format

* genesets route: better error handling, more tests

* lint

* genesets reducer and initial load

* fix lint

* add autosave support for genesets

* remove debug logging

* fix typo

* fix another typo

* update smoke test config for genesets

* smoke test fixes

* more fiddling with smoke tests

client/src/components/autosave/index.js

@@ -5,11 +5,18 @@ import FilenameDialog from "./filenameDialog";
 
 @connect((state) => ({
   annotations: state.annotations,
-  saveInProgress: state.autosave?.saveInProgress ?? false,
+  obsAnnotationSaveInProgress:
+    state.autosave?.obsAnnotationSaveInProgress ?? false,
+  genesetSaveInProgress: state.autosave?.genesetSaveInProgress ?? false,
   error: state.autosave?.error,
   writableCategoriesEnabled: state.config?.parameters?.annotations ?? false,
+  writableGenesetsEnabled: !(
+    state.config?.parameters?.["annotations_genesets_readonly"] ?? true
+  ),
   annoMatrix: state.annoMatrix,
+  genesets: state.genesets,
   lastSavedAnnoMatrix: state.autosave?.lastSavedAnnoMatrix,
+  lastSavedGenesets: state.autosave?.lastSavedGenesets,
 }))
 class Autosave extends React.Component {
   constructor(props) {
@@ -20,11 +27,11 @@ class Autosave extends React.Component {
   }
 
   componentDidMount() {
-    const { writableCategoriesEnabled } = this.props;
+    const { writableCategoriesEnabled, writableGenesetsEnabled } = this.props;
 
     let { timer } = this.state;
     if (timer) clearInterval(timer);
-    if (writableCategoriesEnabled) {
+    if (writableCategoriesEnabled || writableGenesetsEnabled) {
       timer = setInterval(this.tick, 2500);
     } else {
       timer = null;
@@ -38,18 +45,40 @@ class Autosave extends React.Component {
   }
 
   tick = () => {
-    const { dispatch, saveInProgress } = this.props;
-    if (this.needToSave() && !saveInProgress) {
+    const {
+      dispatch,
+      obsAnnotationSaveInProgress,
+      genesetSaveInProgress,
+    } = this.props;
+    if (!obsAnnotationSaveInProgress && this.needToSaveObsAnnotations()) {
       dispatch(actions.saveObsAnnotationsAction());
     }
+    if (!genesetSaveInProgress && this.needToSaveGenesets()) {
+      dispatch(actions.saveGenesetsAction());
+    }
   };
 
-  needToSave = () => {
-    /* return true if we need to save, false if we don't */
+  needToSaveObsAnnotations = () => {
+    /* return true if we need to save obs cell labels, false if we don't */
     const { annoMatrix, lastSavedAnnoMatrix } = this.props;
     return actions.needToSaveObsAnnotations(annoMatrix, lastSavedAnnoMatrix);
   };
 
+  needToSaveGenesets = () => {
+    /* return true if we need to save gene ses, false if we do not */
+    const { genesets, lastSavedGenesets } = this.props;
+    return genesets.initialized && genesets !== lastSavedGenesets;
+  };
+
+  needToSave() {
+    return this.needToSaveGenesets() || this.needToSaveObsAnnotations();
+  }
+
+  saveInProgress() {
+    const { obsAnnotationSaveInProgress, genesetSaveInProgress } = this.props;
+    return obsAnnotationSaveInProgress || genesetSaveInProgress;
+  }
+
   statusMessage() {
     const { error } = this.props;
     if (error) {
@@ -61,12 +90,12 @@ class Autosave extends React.Component {
   render() {
     const {
       writableCategoriesEnabled,
-      saveInProgress,
+      writableGenesetsEnabled,
       lastSavedAnnoMatrix,
     } = this.props;
     const initialDataLoadComplete = lastSavedAnnoMatrix;
 
-    if (!writableCategoriesEnabled) return null;
+    if (!writableCategoriesEnabled && !writableGenesetsEnabled) return null;
 
     return (
       <div
@@ -74,7 +103,7 @@ class Autosave extends React.Component {
         data-testclass={
           !initialDataLoadComplete
             ? "autosave-init"
-            : this.needToSave() || saveInProgress
+            : this.saveInProgress() || this.needToSave()
             ? "autosave-incomplete"
             : "autosave-complete"
         }