mirror of
https://github.com/chanzuckerberg/cellxgene.git
synced 2026-09-22 22:38:11 +08:00
Checkpoint
This commit is contained in:
@@ -420,7 +420,7 @@ def spatial_image_get(request, data_adaptor):
|
||||
return abort_and_log(HTTPStatus.BAD_REQUEST, f"spatial information does not contain requested resolution '{resolution}'")
|
||||
|
||||
response_image = io.BytesIO()
|
||||
img = np.flipud(spatial[library_id]["images"][resolution])
|
||||
img = spatial[library_id]["images"][resolution]
|
||||
matplotlib.pyplot.imsave(response_image, img)
|
||||
response_image.seek(0)
|
||||
|
||||
|
||||
@@ -363,7 +363,10 @@ class DataAdaptor(metaclass=ABCMeta):
|
||||
|
||||
print(f"scale {scale}, translate {translate}")
|
||||
|
||||
normalized_layout = normalized_layout.astype(dtype=np.float32)
|
||||
A = embedding * 0.17011142
|
||||
A = np.column_stack([A[:, 0] / 1921, A[:, 1] / 2000])
|
||||
|
||||
normalized_layout = A.astype(dtype=np.float32)
|
||||
return normalized_layout
|
||||
|
||||
def layout_to_fbs_matrix(self, fields):
|
||||
|
||||
Reference in New Issue
Block a user