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add --obs-names and --var-names CLI params (#371)

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* add --obs-names and --var-names CLI params

* fix lint

* performance improvements in scanpy engine

* fix lint

* fix typo

* correctly handle sparse formats in diffexp

* fix diffexp and 1d slicing

* diffexp uses t-stat, not pval; clean up arg handling

* make _slice a static method

* revise scanpy tests to match new API
This commit is contained in:
Bruce Martin
2018-10-30 14:07:38 -07:00
committed by GitHub
parent 01369801fc
commit b181751493
7 changed files with 133 additions and 88 deletions
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server/requirements.txt
+1 -1
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@@ -1,4 +1,4 @@
anndata==0.6.11
anndata>=0.6.12
click==6.7
Flask==0.12.4
Flask-Caching==1.4.0